Protein–RNA interactions for Protein: Q9ERE8

Tlnrd1, Talin rod domain-containing protein 1, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlnrd1Q9ERE8 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tlnrd1Q9ERE8 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tlnrd1Q9ERE8 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.67■□□□□ 0.9
Tlnrd1Q9ERE8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tlnrd1Q9ERE8 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tlnrd1Q9ERE8 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tlnrd1Q9ERE8 Peli2-204ENSMUST00000226513 1320 ntBASIC20.65■□□□□ 0.9
Tlnrd1Q9ERE8 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tlnrd1Q9ERE8 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.64■□□□□ 0.9
Tlnrd1Q9ERE8 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tlnrd1Q9ERE8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.64■□□□□ 0.89
Tlnrd1Q9ERE8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tlnrd1Q9ERE8 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Tlnrd1Q9ERE8 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tlnrd1Q9ERE8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tlnrd1Q9ERE8 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tlnrd1Q9ERE8 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.63■□□□□ 0.89
Tlnrd1Q9ERE8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tlnrd1Q9ERE8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Tlnrd1Q9ERE8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tlnrd1Q9ERE8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Tlnrd1Q9ERE8 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.59■□□□□ 0.89
Tlnrd1Q9ERE8 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tlnrd1Q9ERE8 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tlnrd1Q9ERE8 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Tlnrd1Q9ERE8 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tlnrd1Q9ERE8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.56■□□□□ 0.88
Tlnrd1Q9ERE8 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Tlnrd1Q9ERE8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tlnrd1Q9ERE8 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tlnrd1Q9ERE8 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tlnrd1Q9ERE8 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Tlnrd1Q9ERE8 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tlnrd1Q9ERE8 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tlnrd1Q9ERE8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tlnrd1Q9ERE8 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tlnrd1Q9ERE8 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tlnrd1Q9ERE8 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tlnrd1Q9ERE8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.49■□□□□ 0.87
Tlnrd1Q9ERE8 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Tlnrd1Q9ERE8 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.49■□□□□ 0.87
Tlnrd1Q9ERE8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Tlnrd1Q9ERE8 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.47■□□□□ 0.87
Tlnrd1Q9ERE8 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.47■□□□□ 0.87
Tlnrd1Q9ERE8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Tlnrd1Q9ERE8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tlnrd1Q9ERE8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tlnrd1Q9ERE8 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.46■□□□□ 0.87
Tlnrd1Q9ERE8 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tlnrd1Q9ERE8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tlnrd1Q9ERE8 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
Tlnrd1Q9ERE8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Tlnrd1Q9ERE8 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Tlnrd1Q9ERE8 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tlnrd1Q9ERE8 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tlnrd1Q9ERE8 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Tlnrd1Q9ERE8 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Tlnrd1Q9ERE8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Tlnrd1Q9ERE8 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tlnrd1Q9ERE8 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tlnrd1Q9ERE8 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Tlnrd1Q9ERE8 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Tlnrd1Q9ERE8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tlnrd1Q9ERE8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.42■□□□□ 0.86
Tlnrd1Q9ERE8 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Tlnrd1Q9ERE8 Gm16148-201ENSMUST00000119653 893 ntBASIC20.41■□□□□ 0.86
Tlnrd1Q9ERE8 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Tlnrd1Q9ERE8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Tlnrd1Q9ERE8 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Tlnrd1Q9ERE8 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tlnrd1Q9ERE8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.4■□□□□ 0.86
Tlnrd1Q9ERE8 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.39■□□□□ 0.86
Tlnrd1Q9ERE8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tlnrd1Q9ERE8 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tlnrd1Q9ERE8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.39■□□□□ 0.85
Tlnrd1Q9ERE8 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tlnrd1Q9ERE8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tlnrd1Q9ERE8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tlnrd1Q9ERE8 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tlnrd1Q9ERE8 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tlnrd1Q9ERE8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tlnrd1Q9ERE8 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.37■□□□□ 0.85
Tlnrd1Q9ERE8 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tlnrd1Q9ERE8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Tlnrd1Q9ERE8 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tlnrd1Q9ERE8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Tlnrd1Q9ERE8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Tlnrd1Q9ERE8 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tlnrd1Q9ERE8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tlnrd1Q9ERE8 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tlnrd1Q9ERE8 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tlnrd1Q9ERE8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tlnrd1Q9ERE8 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Tlnrd1Q9ERE8 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tlnrd1Q9ERE8 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Tlnrd1Q9ERE8 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
Tlnrd1Q9ERE8 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.84
Tlnrd1Q9ERE8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Tlnrd1Q9ERE8 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tlnrd1Q9ERE8 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms