Protein–RNA interactions for Protein: Q9DA19

Cir1, Corepressor interacting with RBPJ 1, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cir1Q9DA19 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cir1Q9DA19 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.07■□□□□ 0.96
Cir1Q9DA19 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cir1Q9DA19 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cir1Q9DA19 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Cir1Q9DA19 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.04■□□□□ 0.96
Cir1Q9DA19 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cir1Q9DA19 Gm16148-201ENSMUST00000119653 893 ntBASIC21.04■□□□□ 0.96
Cir1Q9DA19 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cir1Q9DA19 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.04■□□□□ 0.96
Cir1Q9DA19 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cir1Q9DA19 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cir1Q9DA19 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cir1Q9DA19 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Cir1Q9DA19 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cir1Q9DA19 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.02■□□□□ 0.96
Cir1Q9DA19 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cir1Q9DA19 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cir1Q9DA19 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cir1Q9DA19 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cir1Q9DA19 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cir1Q9DA19 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cir1Q9DA19 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cir1Q9DA19 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.99■□□□□ 0.95
Cir1Q9DA19 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cir1Q9DA19 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.98■□□□□ 0.95
Cir1Q9DA19 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cir1Q9DA19 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cir1Q9DA19 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.95■□□□□ 0.94
Cir1Q9DA19 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Cir1Q9DA19 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Cir1Q9DA19 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cir1Q9DA19 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cir1Q9DA19 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cir1Q9DA19 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cir1Q9DA19 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Cir1Q9DA19 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cir1Q9DA19 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Cir1Q9DA19 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cir1Q9DA19 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cir1Q9DA19 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cir1Q9DA19 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Cir1Q9DA19 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cir1Q9DA19 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cir1Q9DA19 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cir1Q9DA19 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cir1Q9DA19 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cir1Q9DA19 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.94
Cir1Q9DA19 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cir1Q9DA19 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cir1Q9DA19 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cir1Q9DA19 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cir1Q9DA19 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cir1Q9DA19 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.86■□□□□ 0.93
Cir1Q9DA19 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Cir1Q9DA19 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Cir1Q9DA19 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cir1Q9DA19 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cir1Q9DA19 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cir1Q9DA19 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Cir1Q9DA19 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.84■□□□□ 0.93
Cir1Q9DA19 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cir1Q9DA19 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cir1Q9DA19 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cir1Q9DA19 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
Cir1Q9DA19 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cir1Q9DA19 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.81■□□□□ 0.92
Cir1Q9DA19 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cir1Q9DA19 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cir1Q9DA19 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cir1Q9DA19 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cir1Q9DA19 Peli2-204ENSMUST00000226513 1320 ntBASIC20.79■□□□□ 0.92
Cir1Q9DA19 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.78■□□□□ 0.92
Cir1Q9DA19 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Cir1Q9DA19 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cir1Q9DA19 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Cir1Q9DA19 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cir1Q9DA19 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.76■□□□□ 0.91
Cir1Q9DA19 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.76■□□□□ 0.91
Cir1Q9DA19 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cir1Q9DA19 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cir1Q9DA19 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cir1Q9DA19 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
Cir1Q9DA19 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cir1Q9DA19 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.74■□□□□ 0.91
Cir1Q9DA19 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.74■□□□□ 0.91
Cir1Q9DA19 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cir1Q9DA19 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cir1Q9DA19 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cir1Q9DA19 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.73■□□□□ 0.91
Cir1Q9DA19 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cir1Q9DA19 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cir1Q9DA19 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.72■□□□□ 0.91
Cir1Q9DA19 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cir1Q9DA19 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cir1Q9DA19 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cir1Q9DA19 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.91
Cir1Q9DA19 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cir1Q9DA19 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.7■□□□□ 0.9
Cir1Q9DA19 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms