Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ndc80Q9D0F1 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ndc80Q9D0F1 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ndc80Q9D0F1 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Ndc80Q9D0F1 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Ndc80Q9D0F1 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC25.01■■□□□ 1.59
Ndc80Q9D0F1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
Ndc80Q9D0F1 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Ndc80Q9D0F1 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Ndc80Q9D0F1 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Ndc80Q9D0F1 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.98■■□□□ 1.59
Ndc80Q9D0F1 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Ndc80Q9D0F1 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Ndc80Q9D0F1 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Ndc80Q9D0F1 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ndc80Q9D0F1 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ndc80Q9D0F1 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Ndc80Q9D0F1 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Ndc80Q9D0F1 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Ndc80Q9D0F1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Ndc80Q9D0F1 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Ndc80Q9D0F1 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Ndc80Q9D0F1 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Ndc80Q9D0F1 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Ndc80Q9D0F1 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
Ndc80Q9D0F1 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Ndc80Q9D0F1 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC24.9■■□□□ 1.58
Ndc80Q9D0F1 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC24.9■■□□□ 1.58
Ndc80Q9D0F1 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Ndc80Q9D0F1 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24.88■■□□□ 1.57
Ndc80Q9D0F1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Ndc80Q9D0F1 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Ndc80Q9D0F1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
Ndc80Q9D0F1 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Ndc80Q9D0F1 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Ndc80Q9D0F1 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
Ndc80Q9D0F1 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Ndc80Q9D0F1 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
Ndc80Q9D0F1 Tdp2-203ENSMUST00000223804 1136 ntBASIC24.82■■□□□ 1.56
Ndc80Q9D0F1 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ndc80Q9D0F1 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC24.81■■□□□ 1.56
Ndc80Q9D0F1 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ndc80Q9D0F1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Ndc80Q9D0F1 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Ndc80Q9D0F1 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ndc80Q9D0F1 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.79■■□□□ 1.56
Ndc80Q9D0F1 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Ndc80Q9D0F1 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Ndc80Q9D0F1 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Ndc80Q9D0F1 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.78■■□□□ 1.56
Ndc80Q9D0F1 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC24.78■■□□□ 1.56
Ndc80Q9D0F1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ndc80Q9D0F1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Ndc80Q9D0F1 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ndc80Q9D0F1 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Ndc80Q9D0F1 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Ndc80Q9D0F1 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Ndc80Q9D0F1 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Ndc80Q9D0F1 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ndc80Q9D0F1 Amer2-203ENSMUST00000225247 2662 ntBASIC24.72■■□□□ 1.55
Ndc80Q9D0F1 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ndc80Q9D0F1 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.72■■□□□ 1.55
Ndc80Q9D0F1 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.72■■□□□ 1.55
Ndc80Q9D0F1 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC24.7■■□□□ 1.54
Ndc80Q9D0F1 Gm9397-201ENSMUST00000200125 605 ntBASIC24.7■■□□□ 1.54
Ndc80Q9D0F1 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC24.7■■□□□ 1.54
Ndc80Q9D0F1 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Ndc80Q9D0F1 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
Ndc80Q9D0F1 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.69■■□□□ 1.54
Ndc80Q9D0F1 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.68■■□□□ 1.54
Ndc80Q9D0F1 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ndc80Q9D0F1 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
Ndc80Q9D0F1 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.68■■□□□ 1.54
Ndc80Q9D0F1 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ndc80Q9D0F1 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
Ndc80Q9D0F1 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC24.66■■□□□ 1.54
Ndc80Q9D0F1 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ndc80Q9D0F1 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ndc80Q9D0F1 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ndc80Q9D0F1 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Ndc80Q9D0F1 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
Ndc80Q9D0F1 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
Ndc80Q9D0F1 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.63■■□□□ 1.53
Ndc80Q9D0F1 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ndc80Q9D0F1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Ndc80Q9D0F1 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ndc80Q9D0F1 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24.61■■□□□ 1.53
Ndc80Q9D0F1 Gm45855-201ENSMUST00000212546 880 ntBASIC24.61■■□□□ 1.53
Ndc80Q9D0F1 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ndc80Q9D0F1 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Ndc80Q9D0F1 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.6■■□□□ 1.53
Ndc80Q9D0F1 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ndc80Q9D0F1 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Ndc80Q9D0F1 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.59■■□□□ 1.53
Ndc80Q9D0F1 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ndc80Q9D0F1 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Ndc80Q9D0F1 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ndc80Q9D0F1 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ndc80Q9D0F1 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
Ndc80Q9D0F1 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms