Protein–RNA interactions for Protein: Q9CQL6

Mrpl35, 39S ribosomal protein L35, mitochondrial, mousemouse

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl35Q9CQL6 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mrpl35Q9CQL6 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mrpl35Q9CQL6 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mrpl35Q9CQL6 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mrpl35Q9CQL6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mrpl35Q9CQL6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mrpl35Q9CQL6 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mrpl35Q9CQL6 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mrpl35Q9CQL6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Mrpl35Q9CQL6 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Mrpl35Q9CQL6 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mrpl35Q9CQL6 Gm6206-201ENSMUST00000133472 2199 ntBASIC18.17■□□□□ 0.5
Mrpl35Q9CQL6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mrpl35Q9CQL6 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Mrpl35Q9CQL6 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mrpl35Q9CQL6 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mrpl35Q9CQL6 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mrpl35Q9CQL6 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mrpl35Q9CQL6 Gm6345-201ENSMUST00000180378 1691 ntBASIC18.15■□□□□ 0.5
Mrpl35Q9CQL6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mrpl35Q9CQL6 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Mrpl35Q9CQL6 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.15■□□□□ 0.5
Mrpl35Q9CQL6 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.15■□□□□ 0.5
Mrpl35Q9CQL6 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.15■□□□□ 0.5
Mrpl35Q9CQL6 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mrpl35Q9CQL6 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Mrpl35Q9CQL6 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mrpl35Q9CQL6 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mrpl35Q9CQL6 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Mrpl35Q9CQL6 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Mrpl35Q9CQL6 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Mrpl35Q9CQL6 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Mrpl35Q9CQL6 Gm24970-201ENSMUST00000175582 82 ntBASIC18.11■□□□□ 0.49
Mrpl35Q9CQL6 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Mrpl35Q9CQL6 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mrpl35Q9CQL6 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mrpl35Q9CQL6 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC18.1■□□□□ 0.49
Mrpl35Q9CQL6 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC18.1■□□□□ 0.49
Mrpl35Q9CQL6 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.1■□□□□ 0.49
Mrpl35Q9CQL6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mrpl35Q9CQL6 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mrpl35Q9CQL6 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mrpl35Q9CQL6 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mrpl35Q9CQL6 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.09■□□□□ 0.49
Mrpl35Q9CQL6 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Mrpl35Q9CQL6 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Mrpl35Q9CQL6 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Mrpl35Q9CQL6 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Mrpl35Q9CQL6 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Mrpl35Q9CQL6 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Mrpl35Q9CQL6 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Mrpl35Q9CQL6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Mrpl35Q9CQL6 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Mrpl35Q9CQL6 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mrpl35Q9CQL6 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mrpl35Q9CQL6 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mrpl35Q9CQL6 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18.04■□□□□ 0.48
Mrpl35Q9CQL6 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Mrpl35Q9CQL6 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Mrpl35Q9CQL6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Mrpl35Q9CQL6 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC18.02■□□□□ 0.48
Mrpl35Q9CQL6 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Mrpl35Q9CQL6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.01■□□□□ 0.47
Mrpl35Q9CQL6 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC18.01■□□□□ 0.47
Mrpl35Q9CQL6 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.01■□□□□ 0.47
Mrpl35Q9CQL6 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.01■□□□□ 0.47
Mrpl35Q9CQL6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18■□□□□ 0.47
Mrpl35Q9CQL6 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Mrpl35Q9CQL6 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Mrpl35Q9CQL6 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC18■□□□□ 0.47
Mrpl35Q9CQL6 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18■□□□□ 0.47
Mrpl35Q9CQL6 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Mrpl35Q9CQL6 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mrpl35Q9CQL6 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Mrpl35Q9CQL6 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Mrpl35Q9CQL6 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mrpl35Q9CQL6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Mrpl35Q9CQL6 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Mrpl35Q9CQL6 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mrpl35Q9CQL6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mrpl35Q9CQL6 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Mrpl35Q9CQL6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Mrpl35Q9CQL6 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mrpl35Q9CQL6 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mrpl35Q9CQL6 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Mrpl35Q9CQL6 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mrpl35Q9CQL6 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mrpl35Q9CQL6 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Mrpl35Q9CQL6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mrpl35Q9CQL6 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mrpl35Q9CQL6 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mrpl35Q9CQL6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Mrpl35Q9CQL6 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mrpl35Q9CQL6 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mrpl35Q9CQL6 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Mrpl35Q9CQL6 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mrpl35Q9CQL6 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
Mrpl35Q9CQL6 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Mrpl35Q9CQL6 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC17.93■□□□□ 0.46
Mrpl35Q9CQL6 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms