Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC22■■□□□ 1.11
Cspg4Q8VHY0 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC22■■□□□ 1.11
Cspg4Q8VHY0 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cspg4Q8VHY0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.98■■□□□ 1.11
Cspg4Q8VHY0 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cspg4Q8VHY0 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Cspg4Q8VHY0 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
Cspg4Q8VHY0 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cspg4Q8VHY0 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.97■■□□□ 1.11
Cspg4Q8VHY0 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cspg4Q8VHY0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.96■■□□□ 1.11
Cspg4Q8VHY0 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.96■■□□□ 1.11
Cspg4Q8VHY0 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cspg4Q8VHY0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Cspg4Q8VHY0 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Cspg4Q8VHY0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Cspg4Q8VHY0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cspg4Q8VHY0 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.93■■□□□ 1.1
Cspg4Q8VHY0 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cspg4Q8VHY0 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cspg4Q8VHY0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Cspg4Q8VHY0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cspg4Q8VHY0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Cspg4Q8VHY0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Cspg4Q8VHY0 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cspg4Q8VHY0 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cspg4Q8VHY0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cspg4Q8VHY0 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.88■■□□□ 1.09
Cspg4Q8VHY0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Cspg4Q8VHY0 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cspg4Q8VHY0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
Cspg4Q8VHY0 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cspg4Q8VHY0 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Cspg4Q8VHY0 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Cspg4Q8VHY0 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Cspg4Q8VHY0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cspg4Q8VHY0 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cspg4Q8VHY0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Cspg4Q8VHY0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cspg4Q8VHY0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Cspg4Q8VHY0 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cspg4Q8VHY0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.85■■□□□ 1.09
Cspg4Q8VHY0 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cspg4Q8VHY0 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.83■■□□□ 1.09
Cspg4Q8VHY0 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Cspg4Q8VHY0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Cspg4Q8VHY0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cspg4Q8VHY0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Cspg4Q8VHY0 Nkain2-201ENSMUST00000092602 558 ntBASIC21.8■■□□□ 1.08
Cspg4Q8VHY0 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cspg4Q8VHY0 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.79■■□□□ 1.08
Cspg4Q8VHY0 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cspg4Q8VHY0 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.79■■□□□ 1.08
Cspg4Q8VHY0 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Cspg4Q8VHY0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Cspg4Q8VHY0 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cspg4Q8VHY0 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cspg4Q8VHY0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.75■■□□□ 1.07
Cspg4Q8VHY0 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.75■■□□□ 1.07
Cspg4Q8VHY0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.75■■□□□ 1.07
Cspg4Q8VHY0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cspg4Q8VHY0 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cspg4Q8VHY0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Cspg4Q8VHY0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Cspg4Q8VHY0 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
Cspg4Q8VHY0 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cspg4Q8VHY0 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cspg4Q8VHY0 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cspg4Q8VHY0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Cspg4Q8VHY0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cspg4Q8VHY0 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
Cspg4Q8VHY0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.68■■□□□ 1.06
Cspg4Q8VHY0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.67■■□□□ 1.06
Cspg4Q8VHY0 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cspg4Q8VHY0 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cspg4Q8VHY0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cspg4Q8VHY0 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cspg4Q8VHY0 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cspg4Q8VHY0 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cspg4Q8VHY0 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cspg4Q8VHY0 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cspg4Q8VHY0 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cspg4Q8VHY0 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Cspg4Q8VHY0 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cspg4Q8VHY0 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Cspg4Q8VHY0 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Cspg4Q8VHY0 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.6■■□□□ 1.05
Cspg4Q8VHY0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Cspg4Q8VHY0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cspg4Q8VHY0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cspg4Q8VHY0 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cspg4Q8VHY0 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cspg4Q8VHY0 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Cspg4Q8VHY0 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cspg4Q8VHY0 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Cspg4Q8VHY0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.57■■□□□ 1.04
Cspg4Q8VHY0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cspg4Q8VHY0 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.56■■□□□ 1.04
Cspg4Q8VHY0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Cspg4Q8VHY0 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms