Protein–RNA interactions for Protein: Q8QZR0

Tram1l1, Translocating chain-associated membrane protein 1-like 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1l1Q8QZR0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Tram1l1Q8QZR0 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Tram1l1Q8QZR0 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Tram1l1Q8QZR0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Tram1l1Q8QZR0 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Tram1l1Q8QZR0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Tram1l1Q8QZR0 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
Tram1l1Q8QZR0 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Tram1l1Q8QZR0 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Tram1l1Q8QZR0 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Tram1l1Q8QZR0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Tram1l1Q8QZR0 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Tram1l1Q8QZR0 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC25.27■■□□□ 1.64
Tram1l1Q8QZR0 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Tram1l1Q8QZR0 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Tram1l1Q8QZR0 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
Tram1l1Q8QZR0 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Tram1l1Q8QZR0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC25.26■■□□□ 1.63
Tram1l1Q8QZR0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
Tram1l1Q8QZR0 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC25.24■■□□□ 1.63
Tram1l1Q8QZR0 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Tram1l1Q8QZR0 Gm8503-201ENSMUST00000118131 455 ntBASIC25.22■■□□□ 1.63
Tram1l1Q8QZR0 Gm6821-201ENSMUST00000107540 542 ntBASIC25.21■■□□□ 1.63
Tram1l1Q8QZR0 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Tram1l1Q8QZR0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Tram1l1Q8QZR0 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Tram1l1Q8QZR0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
Tram1l1Q8QZR0 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Tram1l1Q8QZR0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Tram1l1Q8QZR0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Tram1l1Q8QZR0 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Tram1l1Q8QZR0 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Tram1l1Q8QZR0 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Tram1l1Q8QZR0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Tram1l1Q8QZR0 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Tram1l1Q8QZR0 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Tram1l1Q8QZR0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Tram1l1Q8QZR0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
Tram1l1Q8QZR0 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Tram1l1Q8QZR0 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Tram1l1Q8QZR0 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Tram1l1Q8QZR0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Tram1l1Q8QZR0 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25.12■■□□□ 1.61
Tram1l1Q8QZR0 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC25.12■■□□□ 1.61
Tram1l1Q8QZR0 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Tram1l1Q8QZR0 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
Tram1l1Q8QZR0 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.1■■□□□ 1.61
Tram1l1Q8QZR0 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
Tram1l1Q8QZR0 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Tram1l1Q8QZR0 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Tram1l1Q8QZR0 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC25.09■■□□□ 1.61
Tram1l1Q8QZR0 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Tram1l1Q8QZR0 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
Tram1l1Q8QZR0 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Tram1l1Q8QZR0 Gm42809-201ENSMUST00000198429 1138 ntBASIC25.08■■□□□ 1.61
Tram1l1Q8QZR0 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
Tram1l1Q8QZR0 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Tram1l1Q8QZR0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Tram1l1Q8QZR0 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
Tram1l1Q8QZR0 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Tram1l1Q8QZR0 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Tram1l1Q8QZR0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25.02■■□□□ 1.6
Tram1l1Q8QZR0 Nkain2-201ENSMUST00000092602 558 ntBASIC25.02■■□□□ 1.6
Tram1l1Q8QZR0 Gm6345-201ENSMUST00000180378 1691 ntBASIC25.01■■□□□ 1.59
Tram1l1Q8QZR0 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Tram1l1Q8QZR0 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Tram1l1Q8QZR0 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC25.01■■□□□ 1.59
Tram1l1Q8QZR0 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
Tram1l1Q8QZR0 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.99■■□□□ 1.59
Tram1l1Q8QZR0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Tram1l1Q8QZR0 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC24.98■■□□□ 1.59
Tram1l1Q8QZR0 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Tram1l1Q8QZR0 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Tram1l1Q8QZR0 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Tram1l1Q8QZR0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC24.96■■□□□ 1.59
Tram1l1Q8QZR0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
Tram1l1Q8QZR0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC24.95■■□□□ 1.58
Tram1l1Q8QZR0 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24.94■■□□□ 1.58
Tram1l1Q8QZR0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Tram1l1Q8QZR0 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
Tram1l1Q8QZR0 Gm5987-201ENSMUST00000196433 1151 ntBASIC24.91■■□□□ 1.58
Tram1l1Q8QZR0 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Tram1l1Q8QZR0 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Tram1l1Q8QZR0 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.9■■□□□ 1.58
Tram1l1Q8QZR0 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Tram1l1Q8QZR0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC24.89■■□□□ 1.58
Tram1l1Q8QZR0 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Tram1l1Q8QZR0 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
Tram1l1Q8QZR0 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Tram1l1Q8QZR0 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.87■■□□□ 1.57
Tram1l1Q8QZR0 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
Tram1l1Q8QZR0 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Tram1l1Q8QZR0 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Tram1l1Q8QZR0 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Tram1l1Q8QZR0 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Tram1l1Q8QZR0 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Tram1l1Q8QZR0 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC24.84■■□□□ 1.57
Tram1l1Q8QZR0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Tram1l1Q8QZR0 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Tram1l1Q8QZR0 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Retrieved 100 of 76,532 protein–RNA pairs in 7.4 ms