Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Vps9d1Q8C190 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Vps9d1Q8C190 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.93■■□□□ 1.26
Vps9d1Q8C190 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
Vps9d1Q8C190 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Vps9d1Q8C190 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
Vps9d1Q8C190 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Vps9d1Q8C190 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.92■■□□□ 1.26
Vps9d1Q8C190 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Vps9d1Q8C190 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Vps9d1Q8C190 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
Vps9d1Q8C190 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Vps9d1Q8C190 Peli2-204ENSMUST00000226513 1320 ntBASIC22.9■■□□□ 1.26
Vps9d1Q8C190 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Vps9d1Q8C190 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.26
Vps9d1Q8C190 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Vps9d1Q8C190 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Vps9d1Q8C190 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Vps9d1Q8C190 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
Vps9d1Q8C190 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Vps9d1Q8C190 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Vps9d1Q8C190 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Vps9d1Q8C190 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Vps9d1Q8C190 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Vps9d1Q8C190 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Vps9d1Q8C190 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Vps9d1Q8C190 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Vps9d1Q8C190 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
Vps9d1Q8C190 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Vps9d1Q8C190 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.24
Vps9d1Q8C190 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Vps9d1Q8C190 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Vps9d1Q8C190 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Vps9d1Q8C190 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Vps9d1Q8C190 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Vps9d1Q8C190 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Vps9d1Q8C190 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Vps9d1Q8C190 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.81■■□□□ 1.24
Vps9d1Q8C190 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Vps9d1Q8C190 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
Vps9d1Q8C190 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Vps9d1Q8C190 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Vps9d1Q8C190 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Vps9d1Q8C190 Zfp131-205ENSMUST00000223812 663 ntBASIC22.79■■□□□ 1.24
Vps9d1Q8C190 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC22.78■■□□□ 1.24
Vps9d1Q8C190 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Vps9d1Q8C190 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Vps9d1Q8C190 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Vps9d1Q8C190 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Vps9d1Q8C190 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
Vps9d1Q8C190 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.73■■□□□ 1.23
Vps9d1Q8C190 Gm16148-201ENSMUST00000119653 893 ntBASIC22.73■■□□□ 1.23
Vps9d1Q8C190 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Vps9d1Q8C190 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC22.72■■□□□ 1.23
Vps9d1Q8C190 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.71■■□□□ 1.23
Vps9d1Q8C190 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Vps9d1Q8C190 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Vps9d1Q8C190 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Vps9d1Q8C190 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Vps9d1Q8C190 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Vps9d1Q8C190 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Vps9d1Q8C190 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Vps9d1Q8C190 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Vps9d1Q8C190 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Vps9d1Q8C190 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Vps9d1Q8C190 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.66■■□□□ 1.22
Vps9d1Q8C190 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Vps9d1Q8C190 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC22.66■■□□□ 1.22
Vps9d1Q8C190 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Vps9d1Q8C190 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
Vps9d1Q8C190 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Vps9d1Q8C190 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Vps9d1Q8C190 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Vps9d1Q8C190 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Vps9d1Q8C190 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.64■■□□□ 1.22
Vps9d1Q8C190 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Vps9d1Q8C190 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Vps9d1Q8C190 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Vps9d1Q8C190 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Vps9d1Q8C190 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22.61■■□□□ 1.21
Vps9d1Q8C190 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Vps9d1Q8C190 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Vps9d1Q8C190 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Vps9d1Q8C190 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Vps9d1Q8C190 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Vps9d1Q8C190 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Vps9d1Q8C190 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Vps9d1Q8C190 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Vps9d1Q8C190 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Vps9d1Q8C190 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Vps9d1Q8C190 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC22.57■■□□□ 1.2
Vps9d1Q8C190 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Vps9d1Q8C190 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Vps9d1Q8C190 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Vps9d1Q8C190 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.56■■□□□ 1.2
Vps9d1Q8C190 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Vps9d1Q8C190 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Vps9d1Q8C190 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Vps9d1Q8C190 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Vps9d1Q8C190 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms