Protein–RNA interactions for Protein: Q8BGB5

Limd2, LIM domain-containing protein 2, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limd2Q8BGB5 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Limd2Q8BGB5 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Limd2Q8BGB5 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Limd2Q8BGB5 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Limd2Q8BGB5 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Limd2Q8BGB5 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Limd2Q8BGB5 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Limd2Q8BGB5 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Limd2Q8BGB5 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Limd2Q8BGB5 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Limd2Q8BGB5 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Limd2Q8BGB5 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Limd2Q8BGB5 Gm24109-201ENSMUST00000175489 103 ntBASIC13.58□□□□□ -0.24
Limd2Q8BGB5 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Limd2Q8BGB5 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Limd2Q8BGB5 AC153890.1-201ENSMUST00000220021 2469 ntBASIC13.57□□□□□ -0.24
Limd2Q8BGB5 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Limd2Q8BGB5 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Limd2Q8BGB5 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Limd2Q8BGB5 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Limd2Q8BGB5 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Limd2Q8BGB5 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Limd2Q8BGB5 Amer2-203ENSMUST00000225247 2662 ntBASIC13.54□□□□□ -0.24
Limd2Q8BGB5 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Limd2Q8BGB5 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Limd2Q8BGB5 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Limd2Q8BGB5 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Limd2Q8BGB5 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Limd2Q8BGB5 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Limd2Q8BGB5 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Limd2Q8BGB5 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Limd2Q8BGB5 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Limd2Q8BGB5 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Limd2Q8BGB5 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Limd2Q8BGB5 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Limd2Q8BGB5 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Limd2Q8BGB5 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Limd2Q8BGB5 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
Limd2Q8BGB5 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Limd2Q8BGB5 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Limd2Q8BGB5 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Limd2Q8BGB5 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC13.49□□□□□ -0.25
Limd2Q8BGB5 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Limd2Q8BGB5 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Limd2Q8BGB5 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Limd2Q8BGB5 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Limd2Q8BGB5 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Limd2Q8BGB5 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Limd2Q8BGB5 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Limd2Q8BGB5 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Limd2Q8BGB5 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Limd2Q8BGB5 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Limd2Q8BGB5 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Limd2Q8BGB5 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Limd2Q8BGB5 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Limd2Q8BGB5 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Limd2Q8BGB5 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Limd2Q8BGB5 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Limd2Q8BGB5 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Limd2Q8BGB5 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Limd2Q8BGB5 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Limd2Q8BGB5 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Limd2Q8BGB5 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Limd2Q8BGB5 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Limd2Q8BGB5 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Limd2Q8BGB5 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Limd2Q8BGB5 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Limd2Q8BGB5 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Limd2Q8BGB5 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Limd2Q8BGB5 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Limd2Q8BGB5 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Limd2Q8BGB5 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Limd2Q8BGB5 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC13.4□□□□□ -0.26
Limd2Q8BGB5 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Limd2Q8BGB5 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Limd2Q8BGB5 Gm20634-201ENSMUST00000090779 2956 ntBASIC13.39□□□□□ -0.27
Limd2Q8BGB5 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Limd2Q8BGB5 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Limd2Q8BGB5 Gm23366-201ENSMUST00000175022 89 ntBASIC13.39□□□□□ -0.27
Limd2Q8BGB5 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Limd2Q8BGB5 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Limd2Q8BGB5 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Limd2Q8BGB5 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Limd2Q8BGB5 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC13.38□□□□□ -0.27
Limd2Q8BGB5 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Limd2Q8BGB5 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Limd2Q8BGB5 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Limd2Q8BGB5 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Limd2Q8BGB5 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Limd2Q8BGB5 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Limd2Q8BGB5 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Limd2Q8BGB5 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Limd2Q8BGB5 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Limd2Q8BGB5 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Limd2Q8BGB5 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Limd2Q8BGB5 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Limd2Q8BGB5 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Limd2Q8BGB5 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Limd2Q8BGB5 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Limd2Q8BGB5 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms