Protein–RNA interactions for Protein: Q811W0

Sox21, Transcription factor SOX-21, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox21Q811W0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sox21Q811W0 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sox21Q811W0 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sox21Q811W0 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sox21Q811W0 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.16■□□□□ 0.82
Sox21Q811W0 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sox21Q811W0 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sox21Q811W0 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sox21Q811W0 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sox21Q811W0 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Sox21Q811W0 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Sox21Q811W0 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sox21Q811W0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sox21Q811W0 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Sox21Q811W0 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.12■□□□□ 0.81
Sox21Q811W0 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sox21Q811W0 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sox21Q811W0 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sox21Q811W0 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sox21Q811W0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.1■□□□□ 0.81
Sox21Q811W0 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.1■□□□□ 0.81
Sox21Q811W0 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Sox21Q811W0 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Sox21Q811W0 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sox21Q811W0 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Sox21Q811W0 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.06■□□□□ 0.8
Sox21Q811W0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sox21Q811W0 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sox21Q811W0 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sox21Q811W0 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sox21Q811W0 Gm6821-201ENSMUST00000107540 542 ntBASIC20.05■□□□□ 0.8
Sox21Q811W0 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sox21Q811W0 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sox21Q811W0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Sox21Q811W0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sox21Q811W0 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Sox21Q811W0 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.03■□□□□ 0.8
Sox21Q811W0 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sox21Q811W0 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sox21Q811W0 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sox21Q811W0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.02■□□□□ 0.8
Sox21Q811W0 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sox21Q811W0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sox21Q811W0 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Sox21Q811W0 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sox21Q811W0 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sox21Q811W0 Gm8503-201ENSMUST00000118131 455 ntBASIC20■□□□□ 0.79
Sox21Q811W0 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Sox21Q811W0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sox21Q811W0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Sox21Q811W0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Sox21Q811W0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Sox21Q811W0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.98■□□□□ 0.79
Sox21Q811W0 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.97■□□□□ 0.79
Sox21Q811W0 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sox21Q811W0 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Sox21Q811W0 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Sox21Q811W0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Sox21Q811W0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sox21Q811W0 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.96■□□□□ 0.79
Sox21Q811W0 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.95■□□□□ 0.78
Sox21Q811W0 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.94■□□□□ 0.78
Sox21Q811W0 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sox21Q811W0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sox21Q811W0 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Sox21Q811W0 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sox21Q811W0 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Sox21Q811W0 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Sox21Q811W0 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox21Q811W0 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.92■□□□□ 0.78
Sox21Q811W0 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox21Q811W0 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sox21Q811W0 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.91■□□□□ 0.78
Sox21Q811W0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sox21Q811W0 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sox21Q811W0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sox21Q811W0 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sox21Q811W0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Sox21Q811W0 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.89■□□□□ 0.77
Sox21Q811W0 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sox21Q811W0 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sox21Q811W0 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sox21Q811W0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sox21Q811W0 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sox21Q811W0 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sox21Q811W0 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.87■□□□□ 0.77
Sox21Q811W0 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sox21Q811W0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sox21Q811W0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sox21Q811W0 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sox21Q811W0 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sox21Q811W0 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sox21Q811W0 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sox21Q811W0 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Sox21Q811W0 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sox21Q811W0 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sox21Q811W0 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sox21Q811W0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.83■□□□□ 0.77
Sox21Q811W0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sox21Q811W0 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms