Protein–RNA interactions for Protein: Q80ZA4

Pkhd1l1, Fibrocystin-L, mousemouse

Predictions only

Length 4,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkhd1l1Q80ZA4 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pkhd1l1Q80ZA4 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC15.43■□□□□ 0.06
Pkhd1l1Q80ZA4 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pkhd1l1Q80ZA4 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pkhd1l1Q80ZA4 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
Pkhd1l1Q80ZA4 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC15.41■□□□□ 0.06
Pkhd1l1Q80ZA4 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pkhd1l1Q80ZA4 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
Pkhd1l1Q80ZA4 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pkhd1l1Q80ZA4 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pkhd1l1Q80ZA4 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pkhd1l1Q80ZA4 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pkhd1l1Q80ZA4 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Pkhd1l1Q80ZA4 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pkhd1l1Q80ZA4 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pkhd1l1Q80ZA4 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pkhd1l1Q80ZA4 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Pkhd1l1Q80ZA4 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pkhd1l1Q80ZA4 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC15.38■□□□□ 0.05
Pkhd1l1Q80ZA4 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Pkhd1l1Q80ZA4 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC15.36■□□□□ 0.05
Pkhd1l1Q80ZA4 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pkhd1l1Q80ZA4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pkhd1l1Q80ZA4 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pkhd1l1Q80ZA4 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pkhd1l1Q80ZA4 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pkhd1l1Q80ZA4 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pkhd1l1Q80ZA4 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pkhd1l1Q80ZA4 Nkain2-201ENSMUST00000092602 558 ntBASIC15.34■□□□□ 0.05
Pkhd1l1Q80ZA4 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC15.33■□□□□ 0.05
Pkhd1l1Q80ZA4 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pkhd1l1Q80ZA4 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pkhd1l1Q80ZA4 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pkhd1l1Q80ZA4 Gm11599-201ENSMUST00000118720 878 ntBASIC15.32■□□□□ 0.04
Pkhd1l1Q80ZA4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC15.32■□□□□ 0.04
Pkhd1l1Q80ZA4 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pkhd1l1Q80ZA4 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pkhd1l1Q80ZA4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pkhd1l1Q80ZA4 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pkhd1l1Q80ZA4 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pkhd1l1Q80ZA4 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Pkhd1l1Q80ZA4 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pkhd1l1Q80ZA4 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Pkhd1l1Q80ZA4 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pkhd1l1Q80ZA4 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pkhd1l1Q80ZA4 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pkhd1l1Q80ZA4 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC15.29■□□□□ 0.04
Pkhd1l1Q80ZA4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pkhd1l1Q80ZA4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pkhd1l1Q80ZA4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pkhd1l1Q80ZA4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pkhd1l1Q80ZA4 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pkhd1l1Q80ZA4 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pkhd1l1Q80ZA4 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pkhd1l1Q80ZA4 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pkhd1l1Q80ZA4 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pkhd1l1Q80ZA4 Cap2-205ENSMUST00000225824 1634 ntBASIC15.26■□□□□ 0.03
Pkhd1l1Q80ZA4 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pkhd1l1Q80ZA4 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pkhd1l1Q80ZA4 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pkhd1l1Q80ZA4 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pkhd1l1Q80ZA4 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pkhd1l1Q80ZA4 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC15.25■□□□□ 0.03
Pkhd1l1Q80ZA4 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pkhd1l1Q80ZA4 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Pkhd1l1Q80ZA4 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pkhd1l1Q80ZA4 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC15.24■□□□□ 0.03
Pkhd1l1Q80ZA4 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Pkhd1l1Q80ZA4 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pkhd1l1Q80ZA4 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC15.23■□□□□ 0.03
Pkhd1l1Q80ZA4 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pkhd1l1Q80ZA4 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Pkhd1l1Q80ZA4 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pkhd1l1Q80ZA4 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pkhd1l1Q80ZA4 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pkhd1l1Q80ZA4 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC15.21■□□□□ 0.02
Pkhd1l1Q80ZA4 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC15.2■□□□□ 0.02
Pkhd1l1Q80ZA4 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pkhd1l1Q80ZA4 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pkhd1l1Q80ZA4 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pkhd1l1Q80ZA4 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC15.18■□□□□ 0.02
Pkhd1l1Q80ZA4 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pkhd1l1Q80ZA4 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pkhd1l1Q80ZA4 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC15.18■□□□□ 0.02
Pkhd1l1Q80ZA4 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pkhd1l1Q80ZA4 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pkhd1l1Q80ZA4 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Pkhd1l1Q80ZA4 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC15.17■□□□□ 0.02
Pkhd1l1Q80ZA4 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pkhd1l1Q80ZA4 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC15.16■□□□□ 0.02
Pkhd1l1Q80ZA4 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Pkhd1l1Q80ZA4 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pkhd1l1Q80ZA4 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pkhd1l1Q80ZA4 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pkhd1l1Q80ZA4 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC15.15■□□□□ 0.02
Pkhd1l1Q80ZA4 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Pkhd1l1Q80ZA4 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pkhd1l1Q80ZA4 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pkhd1l1Q80ZA4 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC15.14■□□□□ 0.01
Pkhd1l1Q80ZA4 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms