Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Tnrc18Q80WC3 Gm11175-201ENSMUST00000116172 543 ntBASIC25.92■■□□□ 1.74
Tnrc18Q80WC3 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Tnrc18Q80WC3 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Tnrc18Q80WC3 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Tnrc18Q80WC3 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
Tnrc18Q80WC3 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Tnrc18Q80WC3 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Tnrc18Q80WC3 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Tnrc18Q80WC3 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
Tnrc18Q80WC3 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Tnrc18Q80WC3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Tnrc18Q80WC3 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
Tnrc18Q80WC3 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Tnrc18Q80WC3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
Tnrc18Q80WC3 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25.86■■□□□ 1.73
Tnrc18Q80WC3 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC25.85■■□□□ 1.73
Tnrc18Q80WC3 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Tnrc18Q80WC3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Tnrc18Q80WC3 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
Tnrc18Q80WC3 Gm30346-201ENSMUST00000218641 1699 ntBASIC25.84■■□□□ 1.73
Tnrc18Q80WC3 Nkain2-201ENSMUST00000092602 558 ntBASIC25.83■■□□□ 1.73
Tnrc18Q80WC3 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC25.83■■□□□ 1.73
Tnrc18Q80WC3 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Tnrc18Q80WC3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Tnrc18Q80WC3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
Tnrc18Q80WC3 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Tnrc18Q80WC3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Tnrc18Q80WC3 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25.8■■□□□ 1.72
Tnrc18Q80WC3 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Tnrc18Q80WC3 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Tnrc18Q80WC3 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
Tnrc18Q80WC3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Tnrc18Q80WC3 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC25.78■■□□□ 1.72
Tnrc18Q80WC3 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Tnrc18Q80WC3 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
Tnrc18Q80WC3 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Tnrc18Q80WC3 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Tnrc18Q80WC3 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Tnrc18Q80WC3 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Tnrc18Q80WC3 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Tnrc18Q80WC3 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
Tnrc18Q80WC3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Tnrc18Q80WC3 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Tnrc18Q80WC3 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Tnrc18Q80WC3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC25.73■■□□□ 1.71
Tnrc18Q80WC3 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Tnrc18Q80WC3 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Tnrc18Q80WC3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Tnrc18Q80WC3 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
Tnrc18Q80WC3 Cap2-205ENSMUST00000225824 1634 ntBASIC25.68■■□□□ 1.7
Tnrc18Q80WC3 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
Tnrc18Q80WC3 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
Tnrc18Q80WC3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Tnrc18Q80WC3 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
Tnrc18Q80WC3 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Tnrc18Q80WC3 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
Tnrc18Q80WC3 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Tnrc18Q80WC3 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC25.61■■□□□ 1.69
Tnrc18Q80WC3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Tnrc18Q80WC3 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
Tnrc18Q80WC3 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
Tnrc18Q80WC3 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC25.59■■□□□ 1.69
Tnrc18Q80WC3 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
Tnrc18Q80WC3 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC25.58■■□□□ 1.69
Tnrc18Q80WC3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Tnrc18Q80WC3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Tnrc18Q80WC3 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Tnrc18Q80WC3 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC25.58■■□□□ 1.68
Tnrc18Q80WC3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC25.57■■□□□ 1.68
Tnrc18Q80WC3 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Tnrc18Q80WC3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Tnrc18Q80WC3 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Tnrc18Q80WC3 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Tnrc18Q80WC3 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Tnrc18Q80WC3 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Tnrc18Q80WC3 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC25.53■■□□□ 1.68
Tnrc18Q80WC3 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
Tnrc18Q80WC3 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Tnrc18Q80WC3 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC25.5■■□□□ 1.67
Tnrc18Q80WC3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Tnrc18Q80WC3 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Tnrc18Q80WC3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Tnrc18Q80WC3 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC25.47■■□□□ 1.67
Tnrc18Q80WC3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Tnrc18Q80WC3 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC25.45■■□□□ 1.66
Tnrc18Q80WC3 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.45■■□□□ 1.66
Tnrc18Q80WC3 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Tnrc18Q80WC3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.45■■□□□ 1.66
Tnrc18Q80WC3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Tnrc18Q80WC3 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Tnrc18Q80WC3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC25.43■■□□□ 1.66
Tnrc18Q80WC3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC25.42■■□□□ 1.66
Tnrc18Q80WC3 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Tnrc18Q80WC3 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Tnrc18Q80WC3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Tnrc18Q80WC3 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Tnrc18Q80WC3 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Tnrc18Q80WC3 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Tnrc18Q80WC3 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC25.38■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms