Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 AC157572.2-201ENSMUST00000226970 908 ntBASIC27.36■■□□□ 1.97
Ush1gQ80T11 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Ush1gQ80T11 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Ush1gQ80T11 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
Ush1gQ80T11 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Ush1gQ80T11 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ush1gQ80T11 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC27.34■■□□□ 1.97
Ush1gQ80T11 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Ush1gQ80T11 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
Ush1gQ80T11 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC27.32■■□□□ 1.96
Ush1gQ80T11 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Ush1gQ80T11 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
Ush1gQ80T11 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
Ush1gQ80T11 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
Ush1gQ80T11 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Ush1gQ80T11 Gm30346-201ENSMUST00000218641 1699 ntBASIC27.29■■□□□ 1.96
Ush1gQ80T11 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Ush1gQ80T11 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Ush1gQ80T11 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC27.25■■□□□ 1.95
Ush1gQ80T11 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Ush1gQ80T11 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ush1gQ80T11 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC27.23■■□□□ 1.95
Ush1gQ80T11 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Ush1gQ80T11 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Ush1gQ80T11 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Ush1gQ80T11 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC27.21■■□□□ 1.95
Ush1gQ80T11 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Ush1gQ80T11 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Ush1gQ80T11 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
Ush1gQ80T11 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Ush1gQ80T11 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC27.2■■□□□ 1.95
Ush1gQ80T11 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC27.2■■□□□ 1.94
Ush1gQ80T11 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Ush1gQ80T11 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Ush1gQ80T11 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Ush1gQ80T11 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC27.18■■□□□ 1.94
Ush1gQ80T11 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Ush1gQ80T11 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Ush1gQ80T11 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC27.16■■□□□ 1.94
Ush1gQ80T11 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Ush1gQ80T11 Gm42809-201ENSMUST00000198429 1138 ntBASIC27.15■■□□□ 1.94
Ush1gQ80T11 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
Ush1gQ80T11 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
Ush1gQ80T11 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Ush1gQ80T11 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Ush1gQ80T11 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Ush1gQ80T11 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Ush1gQ80T11 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Ush1gQ80T11 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Ush1gQ80T11 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC27.11■■□□□ 1.93
Ush1gQ80T11 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Ush1gQ80T11 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
Ush1gQ80T11 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
Ush1gQ80T11 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Ush1gQ80T11 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC27.08■■□□□ 1.93
Ush1gQ80T11 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC27.08■■□□□ 1.92
Ush1gQ80T11 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Ush1gQ80T11 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Ush1gQ80T11 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Ush1gQ80T11 AC153504.1-201ENSMUST00000218379 2290 ntBASIC27.05■■□□□ 1.92
Ush1gQ80T11 Nkain2-201ENSMUST00000092602 558 ntBASIC27.05■■□□□ 1.92
Ush1gQ80T11 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Ush1gQ80T11 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC27.04■■□□□ 1.92
Ush1gQ80T11 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC27.03■■□□□ 1.92
Ush1gQ80T11 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC27.03■■□□□ 1.92
Ush1gQ80T11 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC27.02■■□□□ 1.92
Ush1gQ80T11 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Ush1gQ80T11 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
Ush1gQ80T11 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
Ush1gQ80T11 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Ush1gQ80T11 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Ush1gQ80T11 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC27■■□□□ 1.91
Ush1gQ80T11 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Ush1gQ80T11 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Ush1gQ80T11 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Ush1gQ80T11 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC26.99■■□□□ 1.91
Ush1gQ80T11 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.98■■□□□ 1.91
Ush1gQ80T11 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Ush1gQ80T11 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Ush1gQ80T11 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC26.97■■□□□ 1.91
Ush1gQ80T11 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Ush1gQ80T11 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Ush1gQ80T11 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC26.95■■□□□ 1.91
Ush1gQ80T11 Gm7432-201ENSMUST00000210343 879 ntBASIC26.95■■□□□ 1.9
Ush1gQ80T11 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ush1gQ80T11 Gm6345-201ENSMUST00000180378 1691 ntBASIC26.93■■□□□ 1.9
Ush1gQ80T11 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Ush1gQ80T11 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Ush1gQ80T11 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Ush1gQ80T11 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Ush1gQ80T11 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Ush1gQ80T11 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Ush1gQ80T11 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Ush1gQ80T11 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Ush1gQ80T11 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC26.9■■□□□ 1.9
Ush1gQ80T11 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ush1gQ80T11 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
Ush1gQ80T11 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.9
Ush1gQ80T11 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC26.89■■□□□ 1.9
Ush1gQ80T11 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms