Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rif1Q6PR54 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Rif1Q6PR54 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rif1Q6PR54 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Rif1Q6PR54 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.81■■□□□ 1.08
Rif1Q6PR54 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rif1Q6PR54 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rif1Q6PR54 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Rif1Q6PR54 Gm6311-201ENSMUST00000073790 878 ntBASIC21.8■■□□□ 1.08
Rif1Q6PR54 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rif1Q6PR54 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Rif1Q6PR54 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Rif1Q6PR54 Gm5812-201ENSMUST00000061073 957 ntBASIC21.78■■□□□ 1.08
Rif1Q6PR54 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Rif1Q6PR54 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rif1Q6PR54 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Rif1Q6PR54 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Rif1Q6PR54 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.76■■□□□ 1.07
Rif1Q6PR54 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.76■■□□□ 1.07
Rif1Q6PR54 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Rif1Q6PR54 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Rif1Q6PR54 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Rif1Q6PR54 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.75■■□□□ 1.07
Rif1Q6PR54 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rif1Q6PR54 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.74■■□□□ 1.07
Rif1Q6PR54 Gm12366-201ENSMUST00000121722 873 ntBASIC21.74■■□□□ 1.07
Rif1Q6PR54 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.74■■□□□ 1.07
Rif1Q6PR54 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.74■■□□□ 1.07
Rif1Q6PR54 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rif1Q6PR54 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.74■■□□□ 1.07
Rif1Q6PR54 Gm5786-201ENSMUST00000085368 882 ntBASIC21.74■■□□□ 1.07
Rif1Q6PR54 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Rif1Q6PR54 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rif1Q6PR54 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rif1Q6PR54 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.71■■□□□ 1.07
Rif1Q6PR54 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rif1Q6PR54 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.7■■□□□ 1.06
Rif1Q6PR54 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rif1Q6PR54 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rif1Q6PR54 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.67■■□□□ 1.06
Rif1Q6PR54 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rif1Q6PR54 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rif1Q6PR54 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rif1Q6PR54 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rif1Q6PR54 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.65■■□□□ 1.06
Rif1Q6PR54 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rif1Q6PR54 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.65■■□□□ 1.06
Rif1Q6PR54 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.65■■□□□ 1.06
Rif1Q6PR54 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Rif1Q6PR54 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.61■■□□□ 1.05
Rif1Q6PR54 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rif1Q6PR54 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.61■■□□□ 1.05
Rif1Q6PR54 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Rif1Q6PR54 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Rif1Q6PR54 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Rif1Q6PR54 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rif1Q6PR54 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Rif1Q6PR54 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rif1Q6PR54 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rif1Q6PR54 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rif1Q6PR54 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.55■■□□□ 1.04
Rif1Q6PR54 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.54■■□□□ 1.04
Rif1Q6PR54 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rif1Q6PR54 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rif1Q6PR54 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rif1Q6PR54 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.5■■□□□ 1.03
Rif1Q6PR54 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.5■■□□□ 1.03
Rif1Q6PR54 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
Rif1Q6PR54 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rif1Q6PR54 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rif1Q6PR54 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rif1Q6PR54 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.48■■□□□ 1.03
Rif1Q6PR54 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rif1Q6PR54 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rif1Q6PR54 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rif1Q6PR54 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rif1Q6PR54 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
Rif1Q6PR54 Gm15546-201ENSMUST00000122095 826 ntBASIC21.45■■□□□ 1.02
Rif1Q6PR54 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Rif1Q6PR54 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rif1Q6PR54 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.42■■□□□ 1.02
Rif1Q6PR54 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rif1Q6PR54 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rif1Q6PR54 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.4■■□□□ 1.02
Rif1Q6PR54 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Rif1Q6PR54 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Rif1Q6PR54 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Rif1Q6PR54 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rif1Q6PR54 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rif1Q6PR54 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rif1Q6PR54 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rif1Q6PR54 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Rif1Q6PR54 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Rif1Q6PR54 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Rif1Q6PR54 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Rif1Q6PR54 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Rif1Q6PR54 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Rif1Q6PR54 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.32■■□□□ 1
Rif1Q6PR54 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rif1Q6PR54 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.31■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms