Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Kdm3aQ6PCM1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Kdm3aQ6PCM1 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC30.55■■■□□ 2.48
Kdm3aQ6PCM1 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Kdm3aQ6PCM1 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
Kdm3aQ6PCM1 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
Kdm3aQ6PCM1 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
Kdm3aQ6PCM1 Gm6345-201ENSMUST00000180378 1691 ntBASIC30.52■■■□□ 2.48
Kdm3aQ6PCM1 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC30.52■■■□□ 2.48
Kdm3aQ6PCM1 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
Kdm3aQ6PCM1 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Kdm3aQ6PCM1 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC30.51■■■□□ 2.48
Kdm3aQ6PCM1 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.47
Kdm3aQ6PCM1 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Kdm3aQ6PCM1 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Kdm3aQ6PCM1 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Kdm3aQ6PCM1 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
Kdm3aQ6PCM1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC30.48■■■□□ 2.47
Kdm3aQ6PCM1 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
Kdm3aQ6PCM1 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
Kdm3aQ6PCM1 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Kdm3aQ6PCM1 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
Kdm3aQ6PCM1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC30.45■■■□□ 2.46
Kdm3aQ6PCM1 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Kdm3aQ6PCM1 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Kdm3aQ6PCM1 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Kdm3aQ6PCM1 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC30.42■■■□□ 2.46
Kdm3aQ6PCM1 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Kdm3aQ6PCM1 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Kdm3aQ6PCM1 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Kdm3aQ6PCM1 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Kdm3aQ6PCM1 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
Kdm3aQ6PCM1 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC30.38■■■□□ 2.45
Kdm3aQ6PCM1 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
Kdm3aQ6PCM1 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Kdm3aQ6PCM1 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC30.28■■■□□ 2.44
Kdm3aQ6PCM1 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC30.27■■■□□ 2.44
Kdm3aQ6PCM1 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Kdm3aQ6PCM1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
Kdm3aQ6PCM1 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Kdm3aQ6PCM1 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Kdm3aQ6PCM1 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Kdm3aQ6PCM1 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Kdm3aQ6PCM1 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC30.25■■■□□ 2.43
Kdm3aQ6PCM1 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC30.24■■■□□ 2.43
Kdm3aQ6PCM1 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Kdm3aQ6PCM1 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Kdm3aQ6PCM1 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC30.24■■■□□ 2.43
Kdm3aQ6PCM1 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC30.24■■■□□ 2.43
Kdm3aQ6PCM1 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC30.22■■■□□ 2.43
Kdm3aQ6PCM1 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
Kdm3aQ6PCM1 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Kdm3aQ6PCM1 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Kdm3aQ6PCM1 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC30.18■■■□□ 2.42
Kdm3aQ6PCM1 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Kdm3aQ6PCM1 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Kdm3aQ6PCM1 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Kdm3aQ6PCM1 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Kdm3aQ6PCM1 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Kdm3aQ6PCM1 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Kdm3aQ6PCM1 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
Kdm3aQ6PCM1 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Kdm3aQ6PCM1 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Kdm3aQ6PCM1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC30.11■■■□□ 2.41
Kdm3aQ6PCM1 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Kdm3aQ6PCM1 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC30.1■■■□□ 2.41
Kdm3aQ6PCM1 Gm9939-201ENSMUST00000067161 1154 ntBASIC30.07■■■□□ 2.4
Kdm3aQ6PCM1 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Kdm3aQ6PCM1 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
Kdm3aQ6PCM1 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Kdm3aQ6PCM1 AC153504.1-201ENSMUST00000218379 2290 ntBASIC30.05■■■□□ 2.4
Kdm3aQ6PCM1 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC30.04■■■□□ 2.4
Kdm3aQ6PCM1 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Kdm3aQ6PCM1 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
Kdm3aQ6PCM1 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC30.03■■■□□ 2.4
Kdm3aQ6PCM1 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Kdm3aQ6PCM1 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
Kdm3aQ6PCM1 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC30.01■■■□□ 2.4
Kdm3aQ6PCM1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC30■■■□□ 2.39
Kdm3aQ6PCM1 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC29.98■■■□□ 2.39
Kdm3aQ6PCM1 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
Kdm3aQ6PCM1 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
Kdm3aQ6PCM1 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Kdm3aQ6PCM1 Gm8503-201ENSMUST00000118131 455 ntBASIC29.96■■■□□ 2.39
Kdm3aQ6PCM1 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC29.96■■■□□ 2.39
Kdm3aQ6PCM1 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Kdm3aQ6PCM1 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Kdm3aQ6PCM1 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Kdm3aQ6PCM1 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC29.96■■■□□ 2.39
Kdm3aQ6PCM1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Kdm3aQ6PCM1 Gm6821-201ENSMUST00000107540 542 ntBASIC29.95■■■□□ 2.38
Kdm3aQ6PCM1 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Kdm3aQ6PCM1 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
Kdm3aQ6PCM1 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC29.92■■■□□ 2.38
Kdm3aQ6PCM1 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
Kdm3aQ6PCM1 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Kdm3aQ6PCM1 Gm42809-201ENSMUST00000198429 1138 ntBASIC29.91■■■□□ 2.38
Kdm3aQ6PCM1 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Kdm3aQ6PCM1 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Kdm3aQ6PCM1 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC29.9■■■□□ 2.38
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms