Protein–RNA interactions for Protein: Q62471

Lcn3, Vomeronasal secretory protein 1, mousemouse

Predictions only

Length 182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcn3Q62471 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
Lcn3Q62471 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lcn3Q62471 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lcn3Q62471 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lcn3Q62471 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lcn3Q62471 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Lcn3Q62471 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lcn3Q62471 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Lcn3Q62471 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lcn3Q62471 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lcn3Q62471 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Lcn3Q62471 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Lcn3Q62471 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lcn3Q62471 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Lcn3Q62471 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Lcn3Q62471 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lcn3Q62471 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lcn3Q62471 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lcn3Q62471 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lcn3Q62471 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lcn3Q62471 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
Lcn3Q62471 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lcn3Q62471 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lcn3Q62471 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lcn3Q62471 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lcn3Q62471 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Lcn3Q62471 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
Lcn3Q62471 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Lcn3Q62471 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
Lcn3Q62471 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lcn3Q62471 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.02■□□□□ 0.96
Lcn3Q62471 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
Lcn3Q62471 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.02■□□□□ 0.96
Lcn3Q62471 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Lcn3Q62471 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Lcn3Q62471 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Lcn3Q62471 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Lcn3Q62471 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lcn3Q62471 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lcn3Q62471 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lcn3Q62471 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Lcn3Q62471 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Lcn3Q62471 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21■□□□□ 0.95
Lcn3Q62471 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lcn3Q62471 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Lcn3Q62471 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Lcn3Q62471 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lcn3Q62471 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Lcn3Q62471 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Lcn3Q62471 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lcn3Q62471 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lcn3Q62471 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lcn3Q62471 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
Lcn3Q62471 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lcn3Q62471 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Lcn3Q62471 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lcn3Q62471 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Lcn3Q62471 Mipep-204ENSMUST00000225043 1548 ntBASIC20.95■□□□□ 0.94
Lcn3Q62471 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Lcn3Q62471 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lcn3Q62471 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.94■□□□□ 0.94
Lcn3Q62471 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lcn3Q62471 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lcn3Q62471 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
Lcn3Q62471 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lcn3Q62471 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Lcn3Q62471 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lcn3Q62471 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lcn3Q62471 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lcn3Q62471 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.91■□□□□ 0.94
Lcn3Q62471 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Lcn3Q62471 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.91■□□□□ 0.94
Lcn3Q62471 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lcn3Q62471 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lcn3Q62471 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Lcn3Q62471 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
Lcn3Q62471 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lcn3Q62471 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Lcn3Q62471 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lcn3Q62471 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lcn3Q62471 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lcn3Q62471 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lcn3Q62471 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Lcn3Q62471 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.87■□□□□ 0.93
Lcn3Q62471 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lcn3Q62471 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Lcn3Q62471 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lcn3Q62471 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lcn3Q62471 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lcn3Q62471 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lcn3Q62471 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Lcn3Q62471 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
Lcn3Q62471 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lcn3Q62471 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lcn3Q62471 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Lcn3Q62471 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Lcn3Q62471 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Lcn3Q62471 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lcn3Q62471 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lcn3Q62471 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms