Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Shroom1Q5SX79 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC26.52■■□□□ 1.84
Shroom1Q5SX79 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
Shroom1Q5SX79 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Shroom1Q5SX79 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Shroom1Q5SX79 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Shroom1Q5SX79 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Shroom1Q5SX79 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Shroom1Q5SX79 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.49■■□□□ 1.83
Shroom1Q5SX79 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Shroom1Q5SX79 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC26.48■■□□□ 1.83
Shroom1Q5SX79 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
Shroom1Q5SX79 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC26.48■■□□□ 1.83
Shroom1Q5SX79 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Shroom1Q5SX79 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Shroom1Q5SX79 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Shroom1Q5SX79 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
Shroom1Q5SX79 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Shroom1Q5SX79 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Shroom1Q5SX79 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Shroom1Q5SX79 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Shroom1Q5SX79 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Shroom1Q5SX79 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Shroom1Q5SX79 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
Shroom1Q5SX79 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
Shroom1Q5SX79 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
Shroom1Q5SX79 Gm30346-201ENSMUST00000218641 1699 ntBASIC26.43■■□□□ 1.82
Shroom1Q5SX79 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC26.42■■□□□ 1.82
Shroom1Q5SX79 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Shroom1Q5SX79 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Shroom1Q5SX79 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Shroom1Q5SX79 Gm6821-201ENSMUST00000107540 542 ntBASIC26.39■■□□□ 1.82
Shroom1Q5SX79 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Shroom1Q5SX79 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC26.37■■□□□ 1.81
Shroom1Q5SX79 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
Shroom1Q5SX79 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Shroom1Q5SX79 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC26.34■■□□□ 1.81
Shroom1Q5SX79 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
Shroom1Q5SX79 Gm5987-201ENSMUST00000196433 1151 ntBASIC26.32■■□□□ 1.8
Shroom1Q5SX79 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Shroom1Q5SX79 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
Shroom1Q5SX79 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Shroom1Q5SX79 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Shroom1Q5SX79 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Shroom1Q5SX79 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Shroom1Q5SX79 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
Shroom1Q5SX79 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC26.3■■□□□ 1.8
Shroom1Q5SX79 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
Shroom1Q5SX79 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Shroom1Q5SX79 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Shroom1Q5SX79 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Shroom1Q5SX79 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Shroom1Q5SX79 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC26.27■■□□□ 1.8
Shroom1Q5SX79 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Shroom1Q5SX79 Gm42809-201ENSMUST00000198429 1138 ntBASIC26.26■■□□□ 1.79
Shroom1Q5SX79 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Shroom1Q5SX79 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Shroom1Q5SX79 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Shroom1Q5SX79 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
Shroom1Q5SX79 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Shroom1Q5SX79 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Shroom1Q5SX79 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Shroom1Q5SX79 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Shroom1Q5SX79 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Shroom1Q5SX79 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Shroom1Q5SX79 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Shroom1Q5SX79 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC26.19■■□□□ 1.78
Shroom1Q5SX79 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC26.19■■□□□ 1.78
Shroom1Q5SX79 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Shroom1Q5SX79 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Shroom1Q5SX79 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
Shroom1Q5SX79 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Shroom1Q5SX79 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
Shroom1Q5SX79 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Shroom1Q5SX79 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Shroom1Q5SX79 Gm6206-201ENSMUST00000133472 2199 ntBASIC26.17■■□□□ 1.78
Shroom1Q5SX79 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC26.16■■□□□ 1.78
Shroom1Q5SX79 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC26.15■■□□□ 1.78
Shroom1Q5SX79 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Shroom1Q5SX79 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
Shroom1Q5SX79 Nkain2-201ENSMUST00000092602 558 ntBASIC26.13■■□□□ 1.77
Shroom1Q5SX79 Gm9905-201ENSMUST00000065740 1845 ntBASIC26.13■■□□□ 1.77
Shroom1Q5SX79 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Shroom1Q5SX79 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Shroom1Q5SX79 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Shroom1Q5SX79 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Shroom1Q5SX79 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
Shroom1Q5SX79 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Shroom1Q5SX79 Zxda-201ENSMUST00000117281 2621 ntBASIC26.11■■□□□ 1.77
Shroom1Q5SX79 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC26.1■■□□□ 1.77
Shroom1Q5SX79 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC26.1■■□□□ 1.77
Shroom1Q5SX79 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Shroom1Q5SX79 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
Shroom1Q5SX79 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Shroom1Q5SX79 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Shroom1Q5SX79 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC26.08■■□□□ 1.77
Shroom1Q5SX79 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Shroom1Q5SX79 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Shroom1Q5SX79 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Shroom1Q5SX79 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms