Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC38.15■■■■□ 3.7
Arhgef40Q3UPH7 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC38.14■■■■□ 3.7
Arhgef40Q3UPH7 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC38.09■■■■□ 3.69
Arhgef40Q3UPH7 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC38.07■■■■□ 3.69
Arhgef40Q3UPH7 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC38.07■■■■□ 3.68
Arhgef40Q3UPH7 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC38.06■■■■□ 3.68
Arhgef40Q3UPH7 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC38.05■■■■□ 3.68
Arhgef40Q3UPH7 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC38.04■■■■□ 3.68
Arhgef40Q3UPH7 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC38.04■■■■□ 3.68
Arhgef40Q3UPH7 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC38.04■■■■□ 3.68
Arhgef40Q3UPH7 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC38.02■■■■□ 3.68
Arhgef40Q3UPH7 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC38.02■■■■□ 3.68
Arhgef40Q3UPH7 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC37.97■■■■□ 3.67
Arhgef40Q3UPH7 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC37.97■■■■□ 3.67
Arhgef40Q3UPH7 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC37.96■■■■□ 3.67
Arhgef40Q3UPH7 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC37.96■■■■□ 3.67
Arhgef40Q3UPH7 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC37.94■■■■□ 3.66
Arhgef40Q3UPH7 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC37.93■■■■□ 3.66
Arhgef40Q3UPH7 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC37.93■■■■□ 3.66
Arhgef40Q3UPH7 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC37.92■■■■□ 3.66
Arhgef40Q3UPH7 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC37.91■■■■□ 3.66
Arhgef40Q3UPH7 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC37.91■■■■□ 3.66
Arhgef40Q3UPH7 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC37.91■■■■□ 3.66
Arhgef40Q3UPH7 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC37.9■■■■□ 3.66
Arhgef40Q3UPH7 Gm6658-202ENSMUST00000209493 1885 ntBASIC37.9■■■■□ 3.66
Arhgef40Q3UPH7 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC37.89■■■■□ 3.66
Arhgef40Q3UPH7 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC37.88■■■■□ 3.66
Arhgef40Q3UPH7 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC37.88■■■■□ 3.65
Arhgef40Q3UPH7 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC37.87■■■■□ 3.65
Arhgef40Q3UPH7 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC37.85■■■■□ 3.65
Arhgef40Q3UPH7 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC37.85■■■■□ 3.65
Arhgef40Q3UPH7 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC37.84■■■■□ 3.65
Arhgef40Q3UPH7 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC37.84■■■■□ 3.65
Arhgef40Q3UPH7 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC37.83■■■■□ 3.65
Arhgef40Q3UPH7 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC37.83■■■■□ 3.65
Arhgef40Q3UPH7 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC37.83■■■■□ 3.65
Arhgef40Q3UPH7 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC37.83■■■■□ 3.65
Arhgef40Q3UPH7 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC37.82■■■■□ 3.65
Arhgef40Q3UPH7 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC37.82■■■■□ 3.65
Arhgef40Q3UPH7 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC37.8■■■■□ 3.64
Arhgef40Q3UPH7 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC37.79■■■■□ 3.64
Arhgef40Q3UPH7 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC37.79■■■■□ 3.64
Arhgef40Q3UPH7 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC37.79■■■■□ 3.64
Arhgef40Q3UPH7 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC37.76■■■■□ 3.63
Arhgef40Q3UPH7 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC37.76■■■■□ 3.63
Arhgef40Q3UPH7 Nkain2-201ENSMUST00000092602 558 ntBASIC37.74■■■■□ 3.63
Arhgef40Q3UPH7 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC37.73■■■■□ 3.63
Arhgef40Q3UPH7 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC37.73■■■■□ 3.63
Arhgef40Q3UPH7 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC37.73■■■■□ 3.63
Arhgef40Q3UPH7 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC37.73■■■■□ 3.63
Arhgef40Q3UPH7 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC37.72■■■■□ 3.63
Arhgef40Q3UPH7 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC37.71■■■■□ 3.63
Arhgef40Q3UPH7 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC37.71■■■■□ 3.63
Arhgef40Q3UPH7 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC37.69■■■■□ 3.62
Arhgef40Q3UPH7 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC37.68■■■■□ 3.62
Arhgef40Q3UPH7 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC37.64■■■■□ 3.62
Arhgef40Q3UPH7 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC37.62■■■■□ 3.61
Arhgef40Q3UPH7 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC37.61■■■■□ 3.61
Arhgef40Q3UPH7 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC37.59■■■■□ 3.61
Arhgef40Q3UPH7 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC37.59■■■■□ 3.61
Arhgef40Q3UPH7 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC37.57■■■■□ 3.6
Arhgef40Q3UPH7 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC37.56■■■■□ 3.6
Arhgef40Q3UPH7 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC37.56■■■■□ 3.6
Arhgef40Q3UPH7 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC37.56■■■■□ 3.6
Arhgef40Q3UPH7 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC37.55■■■■□ 3.6
Arhgef40Q3UPH7 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC37.55■■■■□ 3.6
Arhgef40Q3UPH7 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC37.54■■■■□ 3.6
Arhgef40Q3UPH7 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC37.53■■■■□ 3.6
Arhgef40Q3UPH7 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC37.52■■■■□ 3.6
Arhgef40Q3UPH7 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC37.52■■■■□ 3.6
Arhgef40Q3UPH7 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC37.51■■■■□ 3.6
Arhgef40Q3UPH7 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC37.51■■■■□ 3.59
Arhgef40Q3UPH7 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC37.51■■■■□ 3.59
Arhgef40Q3UPH7 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC37.5■■■■□ 3.59
Arhgef40Q3UPH7 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC37.5■■■■□ 3.59
Arhgef40Q3UPH7 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC37.5■■■■□ 3.59
Arhgef40Q3UPH7 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC37.46■■■■□ 3.59
Arhgef40Q3UPH7 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC37.46■■■■□ 3.59
Arhgef40Q3UPH7 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC37.45■■■■□ 3.59
Arhgef40Q3UPH7 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC37.45■■■■□ 3.59
Arhgef40Q3UPH7 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC37.42■■■■□ 3.58
Arhgef40Q3UPH7 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC37.39■■■■□ 3.58
Arhgef40Q3UPH7 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC37.37■■■■□ 3.57
Arhgef40Q3UPH7 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC37.37■■■■□ 3.57
Arhgef40Q3UPH7 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC37.36■■■■□ 3.57
Arhgef40Q3UPH7 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC37.35■■■■□ 3.57
Arhgef40Q3UPH7 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC37.34■■■■□ 3.57
Arhgef40Q3UPH7 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC37.33■■■■□ 3.57
Arhgef40Q3UPH7 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC37.33■■■■□ 3.57
Arhgef40Q3UPH7 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC37.33■■■■□ 3.57
Arhgef40Q3UPH7 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC37.31■■■■□ 3.56
Arhgef40Q3UPH7 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC37.31■■■■□ 3.56
Arhgef40Q3UPH7 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC37.3■■■■□ 3.56
Arhgef40Q3UPH7 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC37.29■■■■□ 3.56
Arhgef40Q3UPH7 Gm7432-201ENSMUST00000210343 879 ntBASIC37.28■■■■□ 3.56
Arhgef40Q3UPH7 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC37.27■■■■□ 3.56
Arhgef40Q3UPH7 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC37.27■■■■□ 3.56
Arhgef40Q3UPH7 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC37.26■■■■□ 3.56
Arhgef40Q3UPH7 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC37.26■■■■□ 3.55
Arhgef40Q3UPH7 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC37.25■■■■□ 3.55
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms