Protein–RNA interactions for Protein: P09225

Lta, Lymphotoxin-alpha, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtaP09225 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
LtaP09225 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.23■□□□□ 0.83
LtaP09225 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LtaP09225 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.23■□□□□ 0.83
LtaP09225 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LtaP09225 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LtaP09225 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.22■□□□□ 0.83
LtaP09225 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LtaP09225 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.22■□□□□ 0.83
LtaP09225 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LtaP09225 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LtaP09225 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LtaP09225 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LtaP09225 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LtaP09225 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LtaP09225 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LtaP09225 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LtaP09225 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.19■□□□□ 0.82
LtaP09225 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LtaP09225 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LtaP09225 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LtaP09225 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LtaP09225 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LtaP09225 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LtaP09225 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.16■□□□□ 0.82
LtaP09225 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
LtaP09225 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
LtaP09225 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.16■□□□□ 0.82
LtaP09225 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LtaP09225 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LtaP09225 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LtaP09225 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.14■□□□□ 0.81
LtaP09225 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LtaP09225 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LtaP09225 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
LtaP09225 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.12■□□□□ 0.81
LtaP09225 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LtaP09225 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LtaP09225 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LtaP09225 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LtaP09225 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LtaP09225 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
LtaP09225 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LtaP09225 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.1■□□□□ 0.81
LtaP09225 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LtaP09225 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LtaP09225 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LtaP09225 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
LtaP09225 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
LtaP09225 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
LtaP09225 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LtaP09225 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LtaP09225 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LtaP09225 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LtaP09225 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
LtaP09225 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.04■□□□□ 0.8
LtaP09225 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LtaP09225 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
LtaP09225 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
LtaP09225 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LtaP09225 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LtaP09225 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LtaP09225 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20■□□□□ 0.79
LtaP09225 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20■□□□□ 0.79
LtaP09225 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
LtaP09225 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.99■□□□□ 0.79
LtaP09225 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LtaP09225 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LtaP09225 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
LtaP09225 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
LtaP09225 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LtaP09225 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.96■□□□□ 0.79
LtaP09225 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.96■□□□□ 0.79
LtaP09225 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LtaP09225 Zxda-201ENSMUST00000117281 2621 ntBASIC19.94■□□□□ 0.78
LtaP09225 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.94■□□□□ 0.78
LtaP09225 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LtaP09225 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LtaP09225 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LtaP09225 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LtaP09225 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.92■□□□□ 0.78
LtaP09225 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
LtaP09225 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LtaP09225 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.91■□□□□ 0.78
LtaP09225 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LtaP09225 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LtaP09225 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LtaP09225 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LtaP09225 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.88■□□□□ 0.77
LtaP09225 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LtaP09225 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LtaP09225 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LtaP09225 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
LtaP09225 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LtaP09225 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LtaP09225 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LtaP09225 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.84■□□□□ 0.77
LtaP09225 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.84■□□□□ 0.77
LtaP09225 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LtaP09225 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms