Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21,51■■□□□ 1,03
Gfra3O35118 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21,51■■□□□ 1,03
Gfra3O35118 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21,51■■□□□ 1,03
Gfra3O35118 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21,51■■□□□ 1,03
Gfra3O35118 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21,5■■□□□ 1,03
Gfra3O35118 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21,49■■□□□ 1,03
Gfra3O35118 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21,49■■□□□ 1,03
Gfra3O35118 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21,49■■□□□ 1,03
Gfra3O35118 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21,48■■□□□ 1,03
Gfra3O35118 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21,48■■□□□ 1,03
Gfra3O35118 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21,48■■□□□ 1,03
Gfra3O35118 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21,48■■□□□ 1,03
Gfra3O35118 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21,48■■□□□ 1,03
Gfra3O35118 AC157572.2-201ENSMUST00000226970 908 ntBASIC21,47■■□□□ 1,03
Gfra3O35118 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21,46■■□□□ 1,03
Gfra3O35118 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21,46■■□□□ 1,03
Gfra3O35118 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21,46■■□□□ 1,03
Gfra3O35118 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21,46■■□□□ 1,03
Gfra3O35118 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21,46■■□□□ 1,03
Gfra3O35118 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21,46■■□□□ 1,03
Gfra3O35118 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21,45■■□□□ 1,02
Gfra3O35118 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21,45■■□□□ 1,02
Gfra3O35118 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21,45■■□□□ 1,02
Gfra3O35118 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21,44■■□□□ 1,02
Gfra3O35118 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21,44■■□□□ 1,02
Gfra3O35118 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21,42■■□□□ 1,02
Gfra3O35118 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21,42■■□□□ 1,02
Gfra3O35118 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21,42■■□□□ 1,02
Gfra3O35118 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21,41■■□□□ 1,02
Gfra3O35118 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21,4■■□□□ 1,02
Gfra3O35118 Gm6345-201ENSMUST00000180378 1691 ntBASIC21,39■■□□□ 1,01
Gfra3O35118 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21,39■■□□□ 1,01
Gfra3O35118 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21,38■■□□□ 1,01
Gfra3O35118 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21,38■■□□□ 1,01
Gfra3O35118 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21,38■■□□□ 1,01
Gfra3O35118 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21,38■■□□□ 1,01
Gfra3O35118 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21,37■■□□□ 1,01
Gfra3O35118 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21,37■■□□□ 1,01
Gfra3O35118 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21,37■■□□□ 1,01
Gfra3O35118 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21,36■■□□□ 1,01
Gfra3O35118 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21,36■■□□□ 1,01
Gfra3O35118 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21,33■■□□□ 1,01
Gfra3O35118 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21,33■■□□□ 1,01
Gfra3O35118 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21,33■■□□□ 1,01
Gfra3O35118 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21,33■■□□□ 1
Gfra3O35118 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21,32■■□□□ 1
Gfra3O35118 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21,31■■□□□ 1
Gfra3O35118 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21,31■■□□□ 1
Gfra3O35118 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21,3■■□□□ 1
Gfra3O35118 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21,3■■□□□ 1
Gfra3O35118 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21,3■■□□□ 1
Gfra3O35118 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21,29■■□□□ 1
Gfra3O35118 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21,29■■□□□ 1
Gfra3O35118 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21,28■■□□□ 1
Gfra3O35118 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21,28■■□□□ 1
Gfra3O35118 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21,27■■□□□ 1
Gfra3O35118 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21,27■■□□□ 1
Gfra3O35118 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21,27■■□□□ 1
Gfra3O35118 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21,26■□□□□ 0,99
Gfra3O35118 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21,26■□□□□ 0,99
Gfra3O35118 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21,25■□□□□ 0,99
Gfra3O35118 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21,25■□□□□ 0,99
Gfra3O35118 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21,25■□□□□ 0,99
Gfra3O35118 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21,24■□□□□ 0,99
Gfra3O35118 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21,23■□□□□ 0,99
Gfra3O35118 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21,23■□□□□ 0,99
Gfra3O35118 Gm9939-201ENSMUST00000067161 1154 ntBASIC21,21■□□□□ 0,99
Gfra3O35118 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21,2■□□□□ 0,99
Gfra3O35118 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21,2■□□□□ 0,98
Gfra3O35118 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21,2■□□□□ 0,98
Gfra3O35118 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21,2■□□□□ 0,98
Gfra3O35118 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21,2■□□□□ 0,98
Gfra3O35118 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21,2■□□□□ 0,98
Gfra3O35118 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21,19■□□□□ 0,98
Gfra3O35118 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21,19■□□□□ 0,98
Gfra3O35118 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21,18■□□□□ 0,98
Gfra3O35118 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21,18■□□□□ 0,98
Gfra3O35118 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21,17■□□□□ 0,98
Gfra3O35118 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21,17■□□□□ 0,98
Gfra3O35118 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21,16■□□□□ 0,98
Gfra3O35118 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21,15■□□□□ 0,98
Gfra3O35118 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21,14■□□□□ 0,97
Gfra3O35118 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21,14■□□□□ 0,97
Gfra3O35118 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21,13■□□□□ 0,97
Gfra3O35118 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21,13■□□□□ 0,97
Gfra3O35118 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21,12■□□□□ 0,97
Gfra3O35118 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21,12■□□□□ 0,97
Gfra3O35118 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21,12■□□□□ 0,97
Gfra3O35118 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21,11■□□□□ 0,97
Gfra3O35118 Gm6821-201ENSMUST00000107540 542 ntBASIC21,11■□□□□ 0,97
Gfra3O35118 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21,11■□□□□ 0,97
Gfra3O35118 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21,1■□□□□ 0,97
Gfra3O35118 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21,09■□□□□ 0,97
Gfra3O35118 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21,09■□□□□ 0,97
Gfra3O35118 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21,09■□□□□ 0,97
Gfra3O35118 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21,08■□□□□ 0,97
Gfra3O35118 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21,08■□□□□ 0,97
Gfra3O35118 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21,08■□□□□ 0,97
Gfra3O35118 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21,07■□□□□ 0,96
Gfra3O35118 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21,07■□□□□ 0,96
Retrieved 100 of 76,532 protein–RNA pairs in 11,5 ms