Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Shank1D3YZU1 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Shank1D3YZU1 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Shank1D3YZU1 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Shank1D3YZU1 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.62■■□□□ 1.21
Shank1D3YZU1 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Shank1D3YZU1 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.6■■□□□ 1.21
Shank1D3YZU1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Shank1D3YZU1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Shank1D3YZU1 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Shank1D3YZU1 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Shank1D3YZU1 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC22.58■■□□□ 1.21
Shank1D3YZU1 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Shank1D3YZU1 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
Shank1D3YZU1 Nkain2-201ENSMUST00000092602 558 ntBASIC22.57■■□□□ 1.2
Shank1D3YZU1 Gm11599-201ENSMUST00000118720 878 ntBASIC22.57■■□□□ 1.2
Shank1D3YZU1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC22.57■■□□□ 1.2
Shank1D3YZU1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Shank1D3YZU1 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Shank1D3YZU1 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Shank1D3YZU1 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Shank1D3YZU1 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Shank1D3YZU1 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Shank1D3YZU1 Gm11175-201ENSMUST00000116172 543 ntBASIC22.53■■□□□ 1.2
Shank1D3YZU1 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Shank1D3YZU1 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Shank1D3YZU1 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Shank1D3YZU1 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Shank1D3YZU1 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
Shank1D3YZU1 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Shank1D3YZU1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Shank1D3YZU1 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC22.5■■□□□ 1.19
Shank1D3YZU1 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Shank1D3YZU1 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Shank1D3YZU1 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Shank1D3YZU1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Shank1D3YZU1 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Shank1D3YZU1 Mir6538-201ENSMUST00000183713 110 ntBASIC22.49■■□□□ 1.19
Shank1D3YZU1 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Shank1D3YZU1 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC22.47■■□□□ 1.19
Shank1D3YZU1 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Shank1D3YZU1 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Shank1D3YZU1 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC22.46■■□□□ 1.19
Shank1D3YZU1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Shank1D3YZU1 Gm30346-201ENSMUST00000218641 1699 ntBASIC22.44■■□□□ 1.18
Shank1D3YZU1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Shank1D3YZU1 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Shank1D3YZU1 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC22.43■■□□□ 1.18
Shank1D3YZU1 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Shank1D3YZU1 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Shank1D3YZU1 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Shank1D3YZU1 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Shank1D3YZU1 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Shank1D3YZU1 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Shank1D3YZU1 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.39■■□□□ 1.18
Shank1D3YZU1 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Shank1D3YZU1 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC22.39■■□□□ 1.17
Shank1D3YZU1 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Shank1D3YZU1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Shank1D3YZU1 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Shank1D3YZU1 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Shank1D3YZU1 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Shank1D3YZU1 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Shank1D3YZU1 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Shank1D3YZU1 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Shank1D3YZU1 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC22.34■■□□□ 1.17
Shank1D3YZU1 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Shank1D3YZU1 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Shank1D3YZU1 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Shank1D3YZU1 Cap2-205ENSMUST00000225824 1634 ntBASIC22.32■■□□□ 1.16
Shank1D3YZU1 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Shank1D3YZU1 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC22.31■■□□□ 1.16
Shank1D3YZU1 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Shank1D3YZU1 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
Shank1D3YZU1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC22.31■■□□□ 1.16
Shank1D3YZU1 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Shank1D3YZU1 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Shank1D3YZU1 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Shank1D3YZU1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Shank1D3YZU1 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC22.28■■□□□ 1.16
Shank1D3YZU1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.26■■□□□ 1.15
Shank1D3YZU1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Shank1D3YZU1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Shank1D3YZU1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Shank1D3YZU1 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Shank1D3YZU1 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC22.24■■□□□ 1.15
Shank1D3YZU1 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Shank1D3YZU1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Shank1D3YZU1 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Shank1D3YZU1 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Shank1D3YZU1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC22.22■■□□□ 1.15
Shank1D3YZU1 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.21■■□□□ 1.15
Shank1D3YZU1 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Shank1D3YZU1 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Shank1D3YZU1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.21■■□□□ 1.15
Shank1D3YZU1 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Shank1D3YZU1 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Shank1D3YZU1 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Shank1D3YZU1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Shank1D3YZU1 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms