Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Igkv5-43A0A0B4J1J2 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Igkv5-43A0A0B4J1J2 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Igkv5-43A0A0B4J1J2 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
Igkv5-43A0A0B4J1J2 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Igkv5-43A0A0B4J1J2 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Igkv5-43A0A0B4J1J2 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Igkv5-43A0A0B4J1J2 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC25.99■■□□□ 1.75
Igkv5-43A0A0B4J1J2 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC25.99■■□□□ 1.75
Igkv5-43A0A0B4J1J2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
Igkv5-43A0A0B4J1J2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Igkv5-43A0A0B4J1J2 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Igkv5-43A0A0B4J1J2 Gm6345-201ENSMUST00000180378 1691 ntBASIC25.98■■□□□ 1.75
Igkv5-43A0A0B4J1J2 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Igkv5-43A0A0B4J1J2 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC25.97■■□□□ 1.75
Igkv5-43A0A0B4J1J2 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
Igkv5-43A0A0B4J1J2 AC157572.2-201ENSMUST00000226970 908 ntBASIC25.93■■□□□ 1.74
Igkv5-43A0A0B4J1J2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Igkv5-43A0A0B4J1J2 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Igkv5-43A0A0B4J1J2 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Igkv5-43A0A0B4J1J2 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC25.91■■□□□ 1.74
Igkv5-43A0A0B4J1J2 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Igkv5-43A0A0B4J1J2 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Igkv5-43A0A0B4J1J2 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Igkv5-43A0A0B4J1J2 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Igkv5-43A0A0B4J1J2 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Igkv5-43A0A0B4J1J2 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
Igkv5-43A0A0B4J1J2 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Igkv5-43A0A0B4J1J2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Igkv5-43A0A0B4J1J2 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
Igkv5-43A0A0B4J1J2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Igkv5-43A0A0B4J1J2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
Igkv5-43A0A0B4J1J2 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC25.86■■□□□ 1.73
Igkv5-43A0A0B4J1J2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Igkv5-43A0A0B4J1J2 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Igkv5-43A0A0B4J1J2 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Igkv5-43A0A0B4J1J2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Igkv5-43A0A0B4J1J2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Igkv5-43A0A0B4J1J2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Igkv5-43A0A0B4J1J2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Igkv5-43A0A0B4J1J2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Igkv5-43A0A0B4J1J2 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
Igkv5-43A0A0B4J1J2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
Igkv5-43A0A0B4J1J2 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Igkv5-43A0A0B4J1J2 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Igkv5-43A0A0B4J1J2 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Igkv5-43A0A0B4J1J2 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC25.73■■□□□ 1.71
Igkv5-43A0A0B4J1J2 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Igkv5-43A0A0B4J1J2 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC25.72■■□□□ 1.71
Igkv5-43A0A0B4J1J2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Igkv5-43A0A0B4J1J2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Igkv5-43A0A0B4J1J2 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Igkv5-43A0A0B4J1J2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.71■■□□□ 1.71
Igkv5-43A0A0B4J1J2 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25.71■■□□□ 1.71
Igkv5-43A0A0B4J1J2 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Igkv5-43A0A0B4J1J2 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Igkv5-43A0A0B4J1J2 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
Igkv5-43A0A0B4J1J2 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Igkv5-43A0A0B4J1J2 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Igkv5-43A0A0B4J1J2 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC25.68■■□□□ 1.7
Igkv5-43A0A0B4J1J2 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC25.68■■□□□ 1.7
Igkv5-43A0A0B4J1J2 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
Igkv5-43A0A0B4J1J2 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Igkv5-43A0A0B4J1J2 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Igkv5-43A0A0B4J1J2 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Igkv5-43A0A0B4J1J2 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
Igkv5-43A0A0B4J1J2 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC25.64■■□□□ 1.7
Igkv5-43A0A0B4J1J2 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Igkv5-43A0A0B4J1J2 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.61■■□□□ 1.69
Igkv5-43A0A0B4J1J2 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Igkv5-43A0A0B4J1J2 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Igkv5-43A0A0B4J1J2 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Igkv5-43A0A0B4J1J2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Igkv5-43A0A0B4J1J2 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Igkv5-43A0A0B4J1J2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Igkv5-43A0A0B4J1J2 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Igkv5-43A0A0B4J1J2 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Igkv5-43A0A0B4J1J2 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Igkv5-43A0A0B4J1J2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC25.54■■□□□ 1.68
Igkv5-43A0A0B4J1J2 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Igkv5-43A0A0B4J1J2 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Igkv5-43A0A0B4J1J2 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Igkv5-43A0A0B4J1J2 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
Igkv5-43A0A0B4J1J2 Gm9939-201ENSMUST00000067161 1154 ntBASIC25.53■■□□□ 1.68
Igkv5-43A0A0B4J1J2 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Igkv5-43A0A0B4J1J2 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Igkv5-43A0A0B4J1J2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC25.53■■□□□ 1.68
Igkv5-43A0A0B4J1J2 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC25.52■■□□□ 1.68
Igkv5-43A0A0B4J1J2 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC25.51■■□□□ 1.68
Igkv5-43A0A0B4J1J2 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Igkv5-43A0A0B4J1J2 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
Igkv5-43A0A0B4J1J2 Zxda-201ENSMUST00000117281 2621 ntBASIC25.5■■□□□ 1.67
Igkv5-43A0A0B4J1J2 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Igkv5-43A0A0B4J1J2 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25.49■■□□□ 1.67
Igkv5-43A0A0B4J1J2 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
Igkv5-43A0A0B4J1J2 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC25.47■■□□□ 1.67
Igkv5-43A0A0B4J1J2 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Igkv5-43A0A0B4J1J2 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
Igkv5-43A0A0B4J1J2 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Igkv5-43A0A0B4J1J2 Gm42809-201ENSMUST00000198429 1138 ntBASIC25.45■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms