Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav6d-7A0A075B6B0 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav6d-7A0A075B6B0 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav6d-7A0A075B6B0 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav6d-7A0A075B6B0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav6d-7A0A075B6B0 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trav6d-7A0A075B6B0 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trav6d-7A0A075B6B0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav6d-7A0A075B6B0 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trav6d-7A0A075B6B0 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav6d-7A0A075B6B0 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trav6d-7A0A075B6B0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC18.85■□□□□ 0.61
Trav6d-7A0A075B6B0 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav6d-7A0A075B6B0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav6d-7A0A075B6B0 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trav6d-7A0A075B6B0 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Trav6d-7A0A075B6B0 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Trav6d-7A0A075B6B0 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav6d-7A0A075B6B0 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Trav6d-7A0A075B6B0 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav6d-7A0A075B6B0 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Trav6d-7A0A075B6B0 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav6d-7A0A075B6B0 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Trav6d-7A0A075B6B0 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Trav6d-7A0A075B6B0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav6d-7A0A075B6B0 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav6d-7A0A075B6B0 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trav6d-7A0A075B6B0 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav6d-7A0A075B6B0 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC18.77■□□□□ 0.6
Trav6d-7A0A075B6B0 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trav6d-7A0A075B6B0 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Trav6d-7A0A075B6B0 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trav6d-7A0A075B6B0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Trav6d-7A0A075B6B0 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav6d-7A0A075B6B0 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trav6d-7A0A075B6B0 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav6d-7A0A075B6B0 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Trav6d-7A0A075B6B0 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav6d-7A0A075B6B0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav6d-7A0A075B6B0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trav6d-7A0A075B6B0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav6d-7A0A075B6B0 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC18.74■□□□□ 0.59
Trav6d-7A0A075B6B0 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trav6d-7A0A075B6B0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Trav6d-7A0A075B6B0 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav6d-7A0A075B6B0 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trav6d-7A0A075B6B0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC18.74■□□□□ 0.59
Trav6d-7A0A075B6B0 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav6d-7A0A075B6B0 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav6d-7A0A075B6B0 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trav6d-7A0A075B6B0 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC18.72■□□□□ 0.59
Trav6d-7A0A075B6B0 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav6d-7A0A075B6B0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav6d-7A0A075B6B0 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav6d-7A0A075B6B0 Gm45855-201ENSMUST00000212546 880 ntBASIC18.71■□□□□ 0.59
Trav6d-7A0A075B6B0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Trav6d-7A0A075B6B0 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav6d-7A0A075B6B0 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.7■□□□□ 0.58
Trav6d-7A0A075B6B0 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.7■□□□□ 0.58
Trav6d-7A0A075B6B0 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav6d-7A0A075B6B0 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav6d-7A0A075B6B0 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Trav6d-7A0A075B6B0 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav6d-7A0A075B6B0 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav6d-7A0A075B6B0 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC18.68■□□□□ 0.58
Trav6d-7A0A075B6B0 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav6d-7A0A075B6B0 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Trav6d-7A0A075B6B0 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trav6d-7A0A075B6B0 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trav6d-7A0A075B6B0 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav6d-7A0A075B6B0 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav6d-7A0A075B6B0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trav6d-7A0A075B6B0 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav6d-7A0A075B6B0 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav6d-7A0A075B6B0 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav6d-7A0A075B6B0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav6d-7A0A075B6B0 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav6d-7A0A075B6B0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
Trav6d-7A0A075B6B0 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC18.64■□□□□ 0.57
Trav6d-7A0A075B6B0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav6d-7A0A075B6B0 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
Trav6d-7A0A075B6B0 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.62■□□□□ 0.57
Trav6d-7A0A075B6B0 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.61■□□□□ 0.57
Trav6d-7A0A075B6B0 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav6d-7A0A075B6B0 Gm30346-201ENSMUST00000218641 1699 ntBASIC18.61■□□□□ 0.57
Trav6d-7A0A075B6B0 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trav6d-7A0A075B6B0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav6d-7A0A075B6B0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav6d-7A0A075B6B0 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav6d-7A0A075B6B0 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav6d-7A0A075B6B0 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.59■□□□□ 0.57
Trav6d-7A0A075B6B0 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Trav6d-7A0A075B6B0 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav6d-7A0A075B6B0 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav6d-7A0A075B6B0 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav6d-7A0A075B6B0 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav6d-7A0A075B6B0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18.57■□□□□ 0.56
Trav6d-7A0A075B6B0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav6d-7A0A075B6B0 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav6d-7A0A075B6B0 Gm9397-201ENSMUST00000200125 605 ntBASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms