Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav13d-1A0A075B606 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav13d-1A0A075B606 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC17.95■□□□□ 0.46
Trav13d-1A0A075B606 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav13d-1A0A075B606 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav13d-1A0A075B606 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav13d-1A0A075B606 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav13d-1A0A075B606 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav13d-1A0A075B606 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav13d-1A0A075B606 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC17.92■□□□□ 0.46
Trav13d-1A0A075B606 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav13d-1A0A075B606 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav13d-1A0A075B606 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC17.91■□□□□ 0.46
Trav13d-1A0A075B606 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav13d-1A0A075B606 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav13d-1A0A075B606 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC17.9■□□□□ 0.46
Trav13d-1A0A075B606 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Trav13d-1A0A075B606 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav13d-1A0A075B606 AC157572.2-201ENSMUST00000226970 908 ntBASIC17.89■□□□□ 0.45
Trav13d-1A0A075B606 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav13d-1A0A075B606 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trav13d-1A0A075B606 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav13d-1A0A075B606 Gm30346-201ENSMUST00000218641 1699 ntBASIC17.88■□□□□ 0.45
Trav13d-1A0A075B606 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav13d-1A0A075B606 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav13d-1A0A075B606 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Trav13d-1A0A075B606 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav13d-1A0A075B606 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav13d-1A0A075B606 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav13d-1A0A075B606 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav13d-1A0A075B606 Gm6206-201ENSMUST00000133472 2199 ntBASIC17.86■□□□□ 0.45
Trav13d-1A0A075B606 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav13d-1A0A075B606 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav13d-1A0A075B606 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav13d-1A0A075B606 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Trav13d-1A0A075B606 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav13d-1A0A075B606 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Trav13d-1A0A075B606 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav13d-1A0A075B606 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav13d-1A0A075B606 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trav13d-1A0A075B606 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav13d-1A0A075B606 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav13d-1A0A075B606 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trav13d-1A0A075B606 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC17.83■□□□□ 0.44
Trav13d-1A0A075B606 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Trav13d-1A0A075B606 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav13d-1A0A075B606 Gm9905-201ENSMUST00000065740 1845 ntBASIC17.82■□□□□ 0.44
Trav13d-1A0A075B606 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav13d-1A0A075B606 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC17.81■□□□□ 0.44
Trav13d-1A0A075B606 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav13d-1A0A075B606 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Trav13d-1A0A075B606 Gm9939-201ENSMUST00000067161 1154 ntBASIC17.8■□□□□ 0.44
Trav13d-1A0A075B606 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav13d-1A0A075B606 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav13d-1A0A075B606 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Trav13d-1A0A075B606 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Trav13d-1A0A075B606 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav13d-1A0A075B606 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav13d-1A0A075B606 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav13d-1A0A075B606 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav13d-1A0A075B606 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav13d-1A0A075B606 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav13d-1A0A075B606 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC17.74■□□□□ 0.43
Trav13d-1A0A075B606 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trav13d-1A0A075B606 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav13d-1A0A075B606 Gm6821-201ENSMUST00000107540 542 ntBASIC17.73■□□□□ 0.43
Trav13d-1A0A075B606 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Trav13d-1A0A075B606 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav13d-1A0A075B606 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav13d-1A0A075B606 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav13d-1A0A075B606 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav13d-1A0A075B606 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav13d-1A0A075B606 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav13d-1A0A075B606 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Trav13d-1A0A075B606 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav13d-1A0A075B606 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav13d-1A0A075B606 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trav13d-1A0A075B606 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav13d-1A0A075B606 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Trav13d-1A0A075B606 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trav13d-1A0A075B606 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav13d-1A0A075B606 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC17.7■□□□□ 0.42
Trav13d-1A0A075B606 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav13d-1A0A075B606 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav13d-1A0A075B606 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC17.69■□□□□ 0.42
Trav13d-1A0A075B606 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trav13d-1A0A075B606 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav13d-1A0A075B606 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav13d-1A0A075B606 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav13d-1A0A075B606 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav13d-1A0A075B606 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav13d-1A0A075B606 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav13d-1A0A075B606 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav13d-1A0A075B606 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav13d-1A0A075B606 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav13d-1A0A075B606 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav13d-1A0A075B606 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav13d-1A0A075B606 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav13d-1A0A075B606 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC17.66■□□□□ 0.42
Trav13d-1A0A075B606 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms