Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trav9-1A0A075B601 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav9-1A0A075B601 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav9-1A0A075B601 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav9-1A0A075B601 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.22■□□□□ 0.67
Trav9-1A0A075B601 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav9-1A0A075B601 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav9-1A0A075B601 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav9-1A0A075B601 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Trav9-1A0A075B601 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.22■□□□□ 0.67
Trav9-1A0A075B601 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Trav9-1A0A075B601 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.2■□□□□ 0.66
Trav9-1A0A075B601 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav9-1A0A075B601 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
Trav9-1A0A075B601 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.2■□□□□ 0.66
Trav9-1A0A075B601 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav9-1A0A075B601 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.18■□□□□ 0.66
Trav9-1A0A075B601 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trav9-1A0A075B601 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Trav9-1A0A075B601 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trav9-1A0A075B601 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Trav9-1A0A075B601 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trav9-1A0A075B601 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Trav9-1A0A075B601 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav9-1A0A075B601 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav9-1A0A075B601 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trav9-1A0A075B601 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trav9-1A0A075B601 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav9-1A0A075B601 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trav9-1A0A075B601 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav9-1A0A075B601 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.13■□□□□ 0.65
Trav9-1A0A075B601 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.13■□□□□ 0.65
Trav9-1A0A075B601 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav9-1A0A075B601 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav9-1A0A075B601 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trav9-1A0A075B601 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav9-1A0A075B601 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trav9-1A0A075B601 Gm16148-201ENSMUST00000119653 893 ntBASIC19.12■□□□□ 0.65
Trav9-1A0A075B601 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav9-1A0A075B601 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav9-1A0A075B601 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Trav9-1A0A075B601 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav9-1A0A075B601 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav9-1A0A075B601 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.09■□□□□ 0.65
Trav9-1A0A075B601 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Trav9-1A0A075B601 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.08■□□□□ 0.64
Trav9-1A0A075B601 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.08■□□□□ 0.64
Trav9-1A0A075B601 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav9-1A0A075B601 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
Trav9-1A0A075B601 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav9-1A0A075B601 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav9-1A0A075B601 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav9-1A0A075B601 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trav9-1A0A075B601 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav9-1A0A075B601 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav9-1A0A075B601 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trav9-1A0A075B601 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav9-1A0A075B601 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trav9-1A0A075B601 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav9-1A0A075B601 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav9-1A0A075B601 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav9-1A0A075B601 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trav9-1A0A075B601 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trav9-1A0A075B601 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav9-1A0A075B601 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Trav9-1A0A075B601 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Trav9-1A0A075B601 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav9-1A0A075B601 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav9-1A0A075B601 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav9-1A0A075B601 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19■□□□□ 0.63
Trav9-1A0A075B601 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19■□□□□ 0.63
Trav9-1A0A075B601 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.99■□□□□ 0.63
Trav9-1A0A075B601 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Trav9-1A0A075B601 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav9-1A0A075B601 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trav9-1A0A075B601 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trav9-1A0A075B601 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Trav9-1A0A075B601 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trav9-1A0A075B601 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav9-1A0A075B601 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav9-1A0A075B601 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav9-1A0A075B601 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav9-1A0A075B601 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav9-1A0A075B601 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trav9-1A0A075B601 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trav9-1A0A075B601 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Trav9-1A0A075B601 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav9-1A0A075B601 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trav9-1A0A075B601 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav9-1A0A075B601 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav9-1A0A075B601 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav9-1A0A075B601 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav9-1A0A075B601 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav9-1A0A075B601 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav9-1A0A075B601 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Trav9-1A0A075B601 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav9-1A0A075B601 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trav9-1A0A075B601 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trav9-1A0A075B601 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.9■□□□□ 0.62
Trav9-1A0A075B601 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 8.7 ms