Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC22.3■■□□□ 1.16
CDH9Q9ULB4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CDH9Q9ULB4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDH9Q9ULB4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
CDH9Q9ULB4 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDH9Q9ULB4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDH9Q9ULB4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CDH9Q9ULB4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
CDH9Q9ULB4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.29■■□□□ 1.16
CDH9Q9ULB4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CDH9Q9ULB4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC22.29■■□□□ 1.16
CDH9Q9ULB4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC22.29■■□□□ 1.16
CDH9Q9ULB4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.29■■□□□ 1.16
CDH9Q9ULB4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.29■■□□□ 1.16
CDH9Q9ULB4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.29■■□□□ 1.16
CDH9Q9ULB4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDH9Q9ULB4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
CDH9Q9ULB4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.28■■□□□ 1.16
CDH9Q9ULB4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CDH9Q9ULB4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
CDH9Q9ULB4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CDH9Q9ULB4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
CDH9Q9ULB4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC22.28■■□□□ 1.16
CDH9Q9ULB4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDH9Q9ULB4 MIR663A-201ENST00000385250 93 ntBASIC22.28■■□□□ 1.16
CDH9Q9ULB4 AC007322.4-201ENST00000509611 723 ntBASIC22.28■■□□□ 1.16
CDH9Q9ULB4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC22.28■■□□□ 1.16
CDH9Q9ULB4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
CDH9Q9ULB4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CDH9Q9ULB4 AC243732.1-201ENST00000612648 864 ntBASIC22.28■■□□□ 1.16
CDH9Q9ULB4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CDH9Q9ULB4 RBM17P2-201ENST00000616397 1405 ntBASIC22.28■■□□□ 1.16
CDH9Q9ULB4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDH9Q9ULB4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDH9Q9ULB4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CDH9Q9ULB4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CDH9Q9ULB4 EP400NL-214ENST00000641289 2402 ntBASIC22.28■■□□□ 1.16
CDH9Q9ULB4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
CDH9Q9ULB4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDH9Q9ULB4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CDH9Q9ULB4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CDH9Q9ULB4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC22.27■■□□□ 1.16
CDH9Q9ULB4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.27■■□□□ 1.16
CDH9Q9ULB4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC22.27■■□□□ 1.16
CDH9Q9ULB4 AC005181.1-201ENST00000604782 1256 ntBASIC22.27■■□□□ 1.16
CDH9Q9ULB4 FGF8-207ENST00000618991 856 ntTSL 3 BASIC22.27■■□□□ 1.16
CDH9Q9ULB4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
CDH9Q9ULB4 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.27■■□□□ 1.16
CDH9Q9ULB4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
CDH9Q9ULB4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CDH9Q9ULB4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.27■■□□□ 1.15
CDH9Q9ULB4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC22.26■■□□□ 1.15
CDH9Q9ULB4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC22.26■■□□□ 1.15
CDH9Q9ULB4 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CDH9Q9ULB4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDH9Q9ULB4 ID1-201ENST00000376105 1233 ntBASIC22.26■■□□□ 1.15
CDH9Q9ULB4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.26■■□□□ 1.15
CDH9Q9ULB4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
CDH9Q9ULB4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC22.26■■□□□ 1.15
CDH9Q9ULB4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.26■■□□□ 1.15
CDH9Q9ULB4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC22.26■■□□□ 1.15
CDH9Q9ULB4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC22.25■■□□□ 1.15
CDH9Q9ULB4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDH9Q9ULB4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC22.25■■□□□ 1.15
CDH9Q9ULB4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CDH9Q9ULB4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC22.25■■□□□ 1.15
CDH9Q9ULB4 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDH9Q9ULB4 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.25■■□□□ 1.15
CDH9Q9ULB4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
CDH9Q9ULB4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDH9Q9ULB4 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDH9Q9ULB4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.25■■□□□ 1.15
CDH9Q9ULB4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
CDH9Q9ULB4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.25■■□□□ 1.15
CDH9Q9ULB4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDH9Q9ULB4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDH9Q9ULB4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.25■■□□□ 1.15
CDH9Q9ULB4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
CDH9Q9ULB4 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
CDH9Q9ULB4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDH9Q9ULB4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDH9Q9ULB4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.24■■□□□ 1.15
CDH9Q9ULB4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDH9Q9ULB4 MAP2K4P1-201ENST00000438453 1195 ntBASIC22.24■■□□□ 1.15
CDH9Q9ULB4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC22.24■■□□□ 1.15
CDH9Q9ULB4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC22.24■■□□□ 1.15
CDH9Q9ULB4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.24■■□□□ 1.15
CDH9Q9ULB4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC22.24■■□□□ 1.15
CDH9Q9ULB4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC22.24■■□□□ 1.15
CDH9Q9ULB4 AL050303.2-201ENST00000619798 666 ntBASIC22.24■■□□□ 1.15
CDH9Q9ULB4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.24■■□□□ 1.15
CDH9Q9ULB4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDH9Q9ULB4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
CDH9Q9ULB4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
CDH9Q9ULB4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CDH9Q9ULB4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDH9Q9ULB4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDH9Q9ULB4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
CDH9Q9ULB4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC22.23■■□□□ 1.15
CDH9Q9ULB4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms