Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VPS45Q9NRW7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.69■■□□□ 1.06
VPS45Q9NRW7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.69■■□□□ 1.06
VPS45Q9NRW7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.69■■□□□ 1.06
VPS45Q9NRW7 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.69■■□□□ 1.06
VPS45Q9NRW7 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VPS45Q9NRW7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
VPS45Q9NRW7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VPS45Q9NRW7 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.69■■□□□ 1.06
VPS45Q9NRW7 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.68■■□□□ 1.06
VPS45Q9NRW7 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
VPS45Q9NRW7 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.68■■□□□ 1.06
VPS45Q9NRW7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VPS45Q9NRW7 SLC29A4P1-201ENST00000398760 971 ntBASIC21.68■■□□□ 1.06
VPS45Q9NRW7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.68■■□□□ 1.06
VPS45Q9NRW7 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.68■■□□□ 1.06
VPS45Q9NRW7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.68■■□□□ 1.06
VPS45Q9NRW7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.68■■□□□ 1.06
VPS45Q9NRW7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.68■■□□□ 1.06
VPS45Q9NRW7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
VPS45Q9NRW7 AC009237.3-201ENST00000393279 1427 ntBASIC21.68■■□□□ 1.06
VPS45Q9NRW7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
VPS45Q9NRW7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.68■■□□□ 1.06
VPS45Q9NRW7 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
VPS45Q9NRW7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
VPS45Q9NRW7 FBXW4P1-201ENST00000426721 2239 ntBASIC21.67■■□□□ 1.06
VPS45Q9NRW7 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VPS45Q9NRW7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
VPS45Q9NRW7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
VPS45Q9NRW7 AC007322.1-201ENST00000426983 750 ntBASIC21.67■■□□□ 1.06
VPS45Q9NRW7 SLC7A5P2-201ENST00000553010 536 ntBASIC21.67■■□□□ 1.06
VPS45Q9NRW7 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.67■■□□□ 1.06
VPS45Q9NRW7 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.67■■□□□ 1.06
VPS45Q9NRW7 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.67■■□□□ 1.06
VPS45Q9NRW7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
VPS45Q9NRW7 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.67■■□□□ 1.06
VPS45Q9NRW7 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.67■■□□□ 1.06
VPS45Q9NRW7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.67■■□□□ 1.06
VPS45Q9NRW7 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VPS45Q9NRW7 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
VPS45Q9NRW7 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
VPS45Q9NRW7 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
VPS45Q9NRW7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.66■■□□□ 1.06
VPS45Q9NRW7 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VPS45Q9NRW7 AP006587.3-201ENST00000525742 1516 ntBASIC21.66■■□□□ 1.06
VPS45Q9NRW7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
VPS45Q9NRW7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
VPS45Q9NRW7 GUSBP6-202ENST00000438529 1198 ntBASIC21.66■■□□□ 1.06
VPS45Q9NRW7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.66■■□□□ 1.06
VPS45Q9NRW7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
VPS45Q9NRW7 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.66■■□□□ 1.06
VPS45Q9NRW7 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.66■■□□□ 1.06
VPS45Q9NRW7 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.66■■□□□ 1.06
VPS45Q9NRW7 AC005181.1-201ENST00000604782 1256 ntBASIC21.66■■□□□ 1.06
VPS45Q9NRW7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
VPS45Q9NRW7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
VPS45Q9NRW7 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
VPS45Q9NRW7 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
VPS45Q9NRW7 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
VPS45Q9NRW7 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
VPS45Q9NRW7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.65■■□□□ 1.06
VPS45Q9NRW7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VPS45Q9NRW7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VPS45Q9NRW7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.65■■□□□ 1.06
VPS45Q9NRW7 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VPS45Q9NRW7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VPS45Q9NRW7 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VPS45Q9NRW7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.65■■□□□ 1.06
VPS45Q9NRW7 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.65■■□□□ 1.06
VPS45Q9NRW7 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.65■■□□□ 1.06
VPS45Q9NRW7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VPS45Q9NRW7 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VPS45Q9NRW7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VPS45Q9NRW7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VPS45Q9NRW7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
VPS45Q9NRW7 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
VPS45Q9NRW7 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
VPS45Q9NRW7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
VPS45Q9NRW7 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
VPS45Q9NRW7 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.64■■□□□ 1.05
VPS45Q9NRW7 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VPS45Q9NRW7 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VPS45Q9NRW7 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
VPS45Q9NRW7 AL138781.1-201ENST00000566567 1274 ntBASIC21.64■■□□□ 1.05
VPS45Q9NRW7 MIR4651-201ENST00000582622 73 ntBASIC21.64■■□□□ 1.05
VPS45Q9NRW7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.64■■□□□ 1.05
VPS45Q9NRW7 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
VPS45Q9NRW7 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VPS45Q9NRW7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VPS45Q9NRW7 AC026471.6-201ENST00000622954 1905 ntBASIC21.64■■□□□ 1.05
VPS45Q9NRW7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
VPS45Q9NRW7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.64■■□□□ 1.05
VPS45Q9NRW7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.63■■□□□ 1.05
VPS45Q9NRW7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
VPS45Q9NRW7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
VPS45Q9NRW7 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.63■■□□□ 1.05
VPS45Q9NRW7 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.63■■□□□ 1.05
VPS45Q9NRW7 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.63■■□□□ 1.05
VPS45Q9NRW7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
VPS45Q9NRW7 AC093827.2-201ENST00000512654 315 ntBASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms