Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 FBXW4P1-201ENST00000426721 2239 ntBASIC18.86■□□□□ 0.61
KIAA1549Q9HCM3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
KIAA1549Q9HCM3 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KIAA1549Q9HCM3 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
KIAA1549Q9HCM3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
KIAA1549Q9HCM3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KIAA1549Q9HCM3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
KIAA1549Q9HCM3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
KIAA1549Q9HCM3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KIAA1549Q9HCM3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.86■□□□□ 0.61
KIAA1549Q9HCM3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.86■□□□□ 0.61
KIAA1549Q9HCM3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.86■□□□□ 0.61
KIAA1549Q9HCM3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.86■□□□□ 0.61
KIAA1549Q9HCM3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
KIAA1549Q9HCM3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KIAA1549Q9HCM3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KIAA1549Q9HCM3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.86■□□□□ 0.61
KIAA1549Q9HCM3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
KIAA1549Q9HCM3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KIAA1549Q9HCM3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
KIAA1549Q9HCM3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
KIAA1549Q9HCM3 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KIAA1549Q9HCM3 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KIAA1549Q9HCM3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.85■□□□□ 0.61
KIAA1549Q9HCM3 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.85■□□□□ 0.61
KIAA1549Q9HCM3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KIAA1549Q9HCM3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
KIAA1549Q9HCM3 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KIAA1549Q9HCM3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
KIAA1549Q9HCM3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KIAA1549Q9HCM3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
KIAA1549Q9HCM3 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.85■□□□□ 0.61
KIAA1549Q9HCM3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.85■□□□□ 0.61
KIAA1549Q9HCM3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
KIAA1549Q9HCM3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KIAA1549Q9HCM3 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KIAA1549Q9HCM3 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
KIAA1549Q9HCM3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.84■□□□□ 0.61
KIAA1549Q9HCM3 CYP2T1P-201ENST00000432607 1285 ntBASIC18.84■□□□□ 0.61
KIAA1549Q9HCM3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.84■□□□□ 0.61
KIAA1549Q9HCM3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
KIAA1549Q9HCM3 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.84■□□□□ 0.61
KIAA1549Q9HCM3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
KIAA1549Q9HCM3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
KIAA1549Q9HCM3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.84■□□□□ 0.61
KIAA1549Q9HCM3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
KIAA1549Q9HCM3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
KIAA1549Q9HCM3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KIAA1549Q9HCM3 KRT16P2-201ENST00000414673 1423 ntBASIC18.84■□□□□ 0.61
KIAA1549Q9HCM3 AC061975.6-201ENST00000579045 1553 ntBASIC18.84■□□□□ 0.61
KIAA1549Q9HCM3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KIAA1549Q9HCM3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.84■□□□□ 0.61
KIAA1549Q9HCM3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
KIAA1549Q9HCM3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KIAA1549Q9HCM3 GPX1P1-201ENST00000388829 606 ntBASIC18.84■□□□□ 0.61
KIAA1549Q9HCM3 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.84■□□□□ 0.61
KIAA1549Q9HCM3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.84■□□□□ 0.61
KIAA1549Q9HCM3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KIAA1549Q9HCM3 AC053503.5-201ENST00000601508 636 ntBASIC18.84■□□□□ 0.61
KIAA1549Q9HCM3 AC013268.1-206ENST00000638368 961 ntBASIC18.84■□□□□ 0.61
KIAA1549Q9HCM3 AC112229.1-201ENST00000639295 961 ntBASIC18.84■□□□□ 0.61
KIAA1549Q9HCM3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.84■□□□□ 0.61
KIAA1549Q9HCM3 AC068338.2-201ENST00000563278 1430 ntBASIC18.84■□□□□ 0.61
KIAA1549Q9HCM3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
KIAA1549Q9HCM3 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
KIAA1549Q9HCM3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
KIAA1549Q9HCM3 AC244015.2-201ENST00000616358 1861 ntBASIC18.83■□□□□ 0.61
KIAA1549Q9HCM3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
KIAA1549Q9HCM3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
KIAA1549Q9HCM3 AC007322.1-201ENST00000426983 750 ntBASIC18.83■□□□□ 0.61
KIAA1549Q9HCM3 AF201337.1-201ENST00000520239 748 ntBASIC18.83■□□□□ 0.61
KIAA1549Q9HCM3 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.83■□□□□ 0.61
KIAA1549Q9HCM3 Z98882.1-201ENST00000622160 2253 ntBASIC18.83■□□□□ 0.6
KIAA1549Q9HCM3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
KIAA1549Q9HCM3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
KIAA1549Q9HCM3 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
KIAA1549Q9HCM3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.83■□□□□ 0.6
KIAA1549Q9HCM3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
KIAA1549Q9HCM3 AC079834.2-201ENST00000609776 1949 ntBASIC18.83■□□□□ 0.6
KIAA1549Q9HCM3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
KIAA1549Q9HCM3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.83■□□□□ 0.6
KIAA1549Q9HCM3 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.82■□□□□ 0.6
KIAA1549Q9HCM3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KIAA1549Q9HCM3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.82■□□□□ 0.6
KIAA1549Q9HCM3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.82■□□□□ 0.6
KIAA1549Q9HCM3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.82■□□□□ 0.6
KIAA1549Q9HCM3 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.82■□□□□ 0.6
KIAA1549Q9HCM3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.82■□□□□ 0.6
KIAA1549Q9HCM3 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.82■□□□□ 0.6
KIAA1549Q9HCM3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KIAA1549Q9HCM3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
KIAA1549Q9HCM3 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
KIAA1549Q9HCM3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KIAA1549Q9HCM3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.82■□□□□ 0.6
KIAA1549Q9HCM3 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.82■□□□□ 0.6
KIAA1549Q9HCM3 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.82■□□□□ 0.6
KIAA1549Q9HCM3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
KIAA1549Q9HCM3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KIAA1549Q9HCM3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KIAA1549Q9HCM3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms