Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRTM1Q9HBL6 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRTM1Q9HBL6 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.2■□□□□ 0.82
LRTM1Q9HBL6 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRTM1Q9HBL6 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LRTM1Q9HBL6 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRTM1Q9HBL6 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRTM1Q9HBL6 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.2■□□□□ 0.82
LRTM1Q9HBL6 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.2■□□□□ 0.82
LRTM1Q9HBL6 AC055733.4-201ENST00000638462 1354 ntBASIC20.2■□□□□ 0.82
LRTM1Q9HBL6 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
LRTM1Q9HBL6 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.19■□□□□ 0.82
LRTM1Q9HBL6 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRTM1Q9HBL6 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRTM1Q9HBL6 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRTM1Q9HBL6 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.19■□□□□ 0.82
LRTM1Q9HBL6 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.19■□□□□ 0.82
LRTM1Q9HBL6 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRTM1Q9HBL6 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
LRTM1Q9HBL6 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LRTM1Q9HBL6 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRTM1Q9HBL6 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
LRTM1Q9HBL6 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.18■□□□□ 0.82
LRTM1Q9HBL6 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.18■□□□□ 0.82
LRTM1Q9HBL6 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRTM1Q9HBL6 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LRTM1Q9HBL6 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRTM1Q9HBL6 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRTM1Q9HBL6 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.18■□□□□ 0.82
LRTM1Q9HBL6 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRTM1Q9HBL6 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
LRTM1Q9HBL6 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRTM1Q9HBL6 AP001330.3-201ENST00000520123 633 ntBASIC20.18■□□□□ 0.82
LRTM1Q9HBL6 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
LRTM1Q9HBL6 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
LRTM1Q9HBL6 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRTM1Q9HBL6 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
LRTM1Q9HBL6 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LRTM1Q9HBL6 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LRTM1Q9HBL6 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LRTM1Q9HBL6 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.18■□□□□ 0.82
LRTM1Q9HBL6 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRTM1Q9HBL6 AC005224.4-201ENST00000583262 1652 ntBASIC20.17■□□□□ 0.82
LRTM1Q9HBL6 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRTM1Q9HBL6 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRTM1Q9HBL6 EDA-201ENST00000338901 1233 ntBASIC20.17■□□□□ 0.82
LRTM1Q9HBL6 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRTM1Q9HBL6 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.17■□□□□ 0.82
LRTM1Q9HBL6 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.17■□□□□ 0.82
LRTM1Q9HBL6 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.17■□□□□ 0.82
LRTM1Q9HBL6 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRTM1Q9HBL6 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LRTM1Q9HBL6 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRTM1Q9HBL6 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRTM1Q9HBL6 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.16■□□□□ 0.82
LRTM1Q9HBL6 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LRTM1Q9HBL6 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LRTM1Q9HBL6 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.16■□□□□ 0.82
LRTM1Q9HBL6 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LRTM1Q9HBL6 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.16■□□□□ 0.82
LRTM1Q9HBL6 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
LRTM1Q9HBL6 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.16■□□□□ 0.82
LRTM1Q9HBL6 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.16■□□□□ 0.82
LRTM1Q9HBL6 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.16■□□□□ 0.82
LRTM1Q9HBL6 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LRTM1Q9HBL6 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRTM1Q9HBL6 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.16■□□□□ 0.82
LRTM1Q9HBL6 AL157384.1-201ENST00000445995 2473 ntBASIC20.16■□□□□ 0.82
LRTM1Q9HBL6 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
LRTM1Q9HBL6 BX005040.4-201ENST00000637145 1518 ntBASIC20.16■□□□□ 0.82
LRTM1Q9HBL6 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LRTM1Q9HBL6 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
LRTM1Q9HBL6 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
LRTM1Q9HBL6 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.16■□□□□ 0.82
LRTM1Q9HBL6 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
LRTM1Q9HBL6 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LRTM1Q9HBL6 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRTM1Q9HBL6 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRTM1Q9HBL6 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.15■□□□□ 0.82
LRTM1Q9HBL6 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.15■□□□□ 0.82
LRTM1Q9HBL6 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.15■□□□□ 0.82
LRTM1Q9HBL6 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LRTM1Q9HBL6 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LRTM1Q9HBL6 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
LRTM1Q9HBL6 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.15■□□□□ 0.82
LRTM1Q9HBL6 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRTM1Q9HBL6 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LRTM1Q9HBL6 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.14■□□□□ 0.82
LRTM1Q9HBL6 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.82
LRTM1Q9HBL6 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
LRTM1Q9HBL6 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
LRTM1Q9HBL6 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
LRTM1Q9HBL6 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.14■□□□□ 0.81
LRTM1Q9HBL6 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRTM1Q9HBL6 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRTM1Q9HBL6 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LRTM1Q9HBL6 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
LRTM1Q9HBL6 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.14■□□□□ 0.81
LRTM1Q9HBL6 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.14■□□□□ 0.81
LRTM1Q9HBL6 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms