Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AC004911.1-201ENST00000416316 871 ntBASIC18.46■□□□□ 0.55
VRK1Q99986 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.46■□□□□ 0.55
VRK1Q99986 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.46■□□□□ 0.55
VRK1Q99986 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.46■□□□□ 0.55
VRK1Q99986 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.46■□□□□ 0.55
VRK1Q99986 TPRG1LP1-201ENST00000598702 760 ntBASIC18.46■□□□□ 0.55
VRK1Q99986 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
VRK1Q99986 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VRK1Q99986 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
VRK1Q99986 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.46■□□□□ 0.55
VRK1Q99986 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VRK1Q99986 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
VRK1Q99986 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VRK1Q99986 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.45■□□□□ 0.54
VRK1Q99986 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VRK1Q99986 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
VRK1Q99986 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VRK1Q99986 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
VRK1Q99986 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.45■□□□□ 0.54
VRK1Q99986 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VRK1Q99986 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.45■□□□□ 0.54
VRK1Q99986 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.45■□□□□ 0.54
VRK1Q99986 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VRK1Q99986 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VRK1Q99986 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
VRK1Q99986 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VRK1Q99986 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VRK1Q99986 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VRK1Q99986 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VRK1Q99986 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VRK1Q99986 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.45■□□□□ 0.54
VRK1Q99986 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VRK1Q99986 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VRK1Q99986 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
VRK1Q99986 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VRK1Q99986 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
VRK1Q99986 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.44■□□□□ 0.54
VRK1Q99986 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.44■□□□□ 0.54
VRK1Q99986 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
VRK1Q99986 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
VRK1Q99986 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
VRK1Q99986 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VRK1Q99986 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VRK1Q99986 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
VRK1Q99986 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
VRK1Q99986 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
VRK1Q99986 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VRK1Q99986 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VRK1Q99986 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.44■□□□□ 0.54
VRK1Q99986 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.44■□□□□ 0.54
VRK1Q99986 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VRK1Q99986 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.44■□□□□ 0.54
VRK1Q99986 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.44■□□□□ 0.54
VRK1Q99986 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.44■□□□□ 0.54
VRK1Q99986 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
VRK1Q99986 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
VRK1Q99986 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.44■□□□□ 0.54
VRK1Q99986 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
VRK1Q99986 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.44■□□□□ 0.54
VRK1Q99986 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.44■□□□□ 0.54
VRK1Q99986 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
VRK1Q99986 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VRK1Q99986 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.43■□□□□ 0.54
VRK1Q99986 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
VRK1Q99986 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
VRK1Q99986 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
VRK1Q99986 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.43■□□□□ 0.54
VRK1Q99986 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.43■□□□□ 0.54
VRK1Q99986 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VRK1Q99986 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
VRK1Q99986 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.43■□□□□ 0.54
VRK1Q99986 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.43■□□□□ 0.54
VRK1Q99986 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
VRK1Q99986 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.43■□□□□ 0.54
VRK1Q99986 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
VRK1Q99986 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
VRK1Q99986 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VRK1Q99986 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.43■□□□□ 0.54
VRK1Q99986 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.42■□□□□ 0.54
VRK1Q99986 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
VRK1Q99986 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VRK1Q99986 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VRK1Q99986 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VRK1Q99986 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VRK1Q99986 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
VRK1Q99986 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VRK1Q99986 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
VRK1Q99986 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VRK1Q99986 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
VRK1Q99986 AC016769.1-201ENST00000409132 1010 ntBASIC18.42■□□□□ 0.54
VRK1Q99986 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.42■□□□□ 0.54
VRK1Q99986 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.42■□□□□ 0.54
VRK1Q99986 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.42■□□□□ 0.54
VRK1Q99986 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VRK1Q99986 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
VRK1Q99986 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
VRK1Q99986 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VRK1Q99986 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
VRK1Q99986 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VRK1Q99986 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms