Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH20Q8N6Y1 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.47■■□□□ 1.03
PCDH20Q8N6Y1 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH20Q8N6Y1 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH20Q8N6Y1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH20Q8N6Y1 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH20Q8N6Y1 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH20Q8N6Y1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDH20Q8N6Y1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH20Q8N6Y1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
PCDH20Q8N6Y1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
PCDH20Q8N6Y1 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH20Q8N6Y1 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH20Q8N6Y1 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH20Q8N6Y1 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.46■■□□□ 1.03
PCDH20Q8N6Y1 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.46■■□□□ 1.03
PCDH20Q8N6Y1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.46■■□□□ 1.03
PCDH20Q8N6Y1 UBE2DNL-204ENST00000602536 740 ntBASIC21.46■■□□□ 1.03
PCDH20Q8N6Y1 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.46■■□□□ 1.03
PCDH20Q8N6Y1 AC026471.6-201ENST00000622954 1905 ntBASIC21.46■■□□□ 1.03
PCDH20Q8N6Y1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH20Q8N6Y1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH20Q8N6Y1 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH20Q8N6Y1 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH20Q8N6Y1 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH20Q8N6Y1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
PCDH20Q8N6Y1 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH20Q8N6Y1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
PCDH20Q8N6Y1 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.03
PCDH20Q8N6Y1 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
PCDH20Q8N6Y1 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
PCDH20Q8N6Y1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH20Q8N6Y1 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH20Q8N6Y1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.45■■□□□ 1.02
PCDH20Q8N6Y1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH20Q8N6Y1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH20Q8N6Y1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH20Q8N6Y1 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.45■■□□□ 1.02
PCDH20Q8N6Y1 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.45■■□□□ 1.02
PCDH20Q8N6Y1 AC080038.1-201ENST00000611274 1154 ntBASIC21.45■■□□□ 1.02
PCDH20Q8N6Y1 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH20Q8N6Y1 AC008175.2-201ENST00000612840 297 ntBASIC21.45■■□□□ 1.02
PCDH20Q8N6Y1 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH20Q8N6Y1 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.45■■□□□ 1.02
PCDH20Q8N6Y1 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH20Q8N6Y1 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDH20Q8N6Y1 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH20Q8N6Y1 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
PCDH20Q8N6Y1 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDH20Q8N6Y1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.44■■□□□ 1.02
PCDH20Q8N6Y1 AC011767.1-201ENST00000617410 1153 ntBASIC21.44■■□□□ 1.02
PCDH20Q8N6Y1 MYCNOS-205ENST00000641950 531 ntBASIC21.44■■□□□ 1.02
PCDH20Q8N6Y1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDH20Q8N6Y1 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDH20Q8N6Y1 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDH20Q8N6Y1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDH20Q8N6Y1 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDH20Q8N6Y1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDH20Q8N6Y1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDH20Q8N6Y1 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH20Q8N6Y1 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.43■■□□□ 1.02
PCDH20Q8N6Y1 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.43■■□□□ 1.02
PCDH20Q8N6Y1 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.43■■□□□ 1.02
PCDH20Q8N6Y1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH20Q8N6Y1 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH20Q8N6Y1 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH20Q8N6Y1 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH20Q8N6Y1 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.43■■□□□ 1.02
PCDH20Q8N6Y1 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
PCDH20Q8N6Y1 POU5F1P4-201ENST00000413175 1085 ntBASIC21.43■■□□□ 1.02
PCDH20Q8N6Y1 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.43■■□□□ 1.02
PCDH20Q8N6Y1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
PCDH20Q8N6Y1 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.43■■□□□ 1.02
PCDH20Q8N6Y1 MFSD11-216ENST00000590393 1141 ntBASIC21.43■■□□□ 1.02
PCDH20Q8N6Y1 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH20Q8N6Y1 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.43■■□□□ 1.02
PCDH20Q8N6Y1 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH20Q8N6Y1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.43■■□□□ 1.02
PCDH20Q8N6Y1 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH20Q8N6Y1 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH20Q8N6Y1 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH20Q8N6Y1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH20Q8N6Y1 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDH20Q8N6Y1 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.42■■□□□ 1.02
PCDH20Q8N6Y1 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDH20Q8N6Y1 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.42■■□□□ 1.02
PCDH20Q8N6Y1 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDH20Q8N6Y1 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.42■■□□□ 1.02
PCDH20Q8N6Y1 AC090192.1-201ENST00000517740 490 ntBASIC21.42■■□□□ 1.02
PCDH20Q8N6Y1 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.42■■□□□ 1.02
PCDH20Q8N6Y1 AC010542.4-201ENST00000563151 1910 ntBASIC21.42■■□□□ 1.02
PCDH20Q8N6Y1 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.42■■□□□ 1.02
PCDH20Q8N6Y1 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDH20Q8N6Y1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDH20Q8N6Y1 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDH20Q8N6Y1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH20Q8N6Y1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH20Q8N6Y1 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH20Q8N6Y1 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH20Q8N6Y1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms