Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Rnf220Q6PDX6 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.46■□□□□ 0.39
Rnf220Q6PDX6 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Rnf220Q6PDX6 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf220Q6PDX6 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf220Q6PDX6 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf220Q6PDX6 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf220Q6PDX6 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Rnf220Q6PDX6 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf220Q6PDX6 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf220Q6PDX6 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf220Q6PDX6 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf220Q6PDX6 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Rnf220Q6PDX6 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf220Q6PDX6 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf220Q6PDX6 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf220Q6PDX6 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf220Q6PDX6 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.45■□□□□ 0.38
Rnf220Q6PDX6 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf220Q6PDX6 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf220Q6PDX6 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf220Q6PDX6 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf220Q6PDX6 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf220Q6PDX6 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.45■□□□□ 0.38
Rnf220Q6PDX6 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf220Q6PDX6 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf220Q6PDX6 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf220Q6PDX6 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf220Q6PDX6 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf220Q6PDX6 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.44■□□□□ 0.38
Rnf220Q6PDX6 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf220Q6PDX6 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.44■□□□□ 0.38
Rnf220Q6PDX6 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf220Q6PDX6 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf220Q6PDX6 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf220Q6PDX6 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf220Q6PDX6 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf220Q6PDX6 Etf1-202ENSMUST00000180351 108 ntBASIC17.44■□□□□ 0.38
Rnf220Q6PDX6 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.44■□□□□ 0.38
Rnf220Q6PDX6 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf220Q6PDX6 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf220Q6PDX6 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf220Q6PDX6 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf220Q6PDX6 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.44■□□□□ 0.38
Rnf220Q6PDX6 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Rnf220Q6PDX6 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Rnf220Q6PDX6 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf220Q6PDX6 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf220Q6PDX6 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf220Q6PDX6 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
Rnf220Q6PDX6 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Rnf220Q6PDX6 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf220Q6PDX6 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.44■□□□□ 0.38
Rnf220Q6PDX6 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Rnf220Q6PDX6 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf220Q6PDX6 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf220Q6PDX6 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf220Q6PDX6 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Rnf220Q6PDX6 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf220Q6PDX6 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf220Q6PDX6 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf220Q6PDX6 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.43■□□□□ 0.38
Rnf220Q6PDX6 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf220Q6PDX6 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
Rnf220Q6PDX6 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf220Q6PDX6 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf220Q6PDX6 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf220Q6PDX6 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.43■□□□□ 0.38
Rnf220Q6PDX6 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Rnf220Q6PDX6 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.43■□□□□ 0.38
Rnf220Q6PDX6 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf220Q6PDX6 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf220Q6PDX6 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf220Q6PDX6 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Rnf220Q6PDX6 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
Rnf220Q6PDX6 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf220Q6PDX6 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf220Q6PDX6 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf220Q6PDX6 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf220Q6PDX6 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf220Q6PDX6 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf220Q6PDX6 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf220Q6PDX6 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Rnf220Q6PDX6 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Rnf220Q6PDX6 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf220Q6PDX6 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Rnf220Q6PDX6 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf220Q6PDX6 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf220Q6PDX6 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Rnf220Q6PDX6 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Rnf220Q6PDX6 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf220Q6PDX6 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf220Q6PDX6 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.41■□□□□ 0.38
Rnf220Q6PDX6 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf220Q6PDX6 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf220Q6PDX6 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf220Q6PDX6 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf220Q6PDX6 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
Rnf220Q6PDX6 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.41■□□□□ 0.38
Rnf220Q6PDX6 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms