Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS13DQ5THJ4 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
VPS13DQ5THJ4 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS13DQ5THJ4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
VPS13DQ5THJ4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS13DQ5THJ4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
VPS13DQ5THJ4 C1QBPP2-201ENST00000528754 825 ntBASIC14.29□□□□□ -0.12
VPS13DQ5THJ4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VPS13DQ5THJ4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC14.29□□□□□ -0.12
VPS13DQ5THJ4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS13DQ5THJ4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VPS13DQ5THJ4 POU5F1P4-201ENST00000413175 1085 ntBASIC14.29□□□□□ -0.12
VPS13DQ5THJ4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC14.29□□□□□ -0.12
VPS13DQ5THJ4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VPS13DQ5THJ4 NME6-213ENST00000451657 871 ntTSL 2 BASIC14.29□□□□□ -0.12
VPS13DQ5THJ4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VPS13DQ5THJ4 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VPS13DQ5THJ4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC14.28□□□□□ -0.12
VPS13DQ5THJ4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS13DQ5THJ4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS13DQ5THJ4 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS13DQ5THJ4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC14.28□□□□□ -0.12
VPS13DQ5THJ4 AL359736.2-201ENST00000621992 437 ntBASIC14.28□□□□□ -0.12
VPS13DQ5THJ4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
VPS13DQ5THJ4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
VPS13DQ5THJ4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC14.28□□□□□ -0.12
VPS13DQ5THJ4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS13DQ5THJ4 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS13DQ5THJ4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VPS13DQ5THJ4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC14.28□□□□□ -0.12
VPS13DQ5THJ4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
VPS13DQ5THJ4 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.28□□□□□ -0.12
VPS13DQ5THJ4 AC073912.3-201ENST00000624414 853 ntBASIC14.28□□□□□ -0.12
VPS13DQ5THJ4 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
VPS13DQ5THJ4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VPS13DQ5THJ4 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS13DQ5THJ4 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC14.28□□□□□ -0.12
VPS13DQ5THJ4 PKM-204ENST00000449901 2526 ntTSL 2 BASIC14.28□□□□□ -0.12
VPS13DQ5THJ4 BAALC-201ENST00000297574 801 ntTSL 3 BASIC14.28□□□□□ -0.12
VPS13DQ5THJ4 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC14.28□□□□□ -0.12
VPS13DQ5THJ4 LSM12P1-201ENST00000411836 588 ntBASIC14.28□□□□□ -0.12
VPS13DQ5THJ4 AL589743.5-201ENST00000616611 1050 ntBASIC14.28□□□□□ -0.12
VPS13DQ5THJ4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
VPS13DQ5THJ4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
VPS13DQ5THJ4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC14.27□□□□□ -0.12
VPS13DQ5THJ4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VPS13DQ5THJ4 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC14.27□□□□□ -0.12
VPS13DQ5THJ4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC14.27□□□□□ -0.12
VPS13DQ5THJ4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC14.27□□□□□ -0.12
VPS13DQ5THJ4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC14.27□□□□□ -0.12
VPS13DQ5THJ4 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VPS13DQ5THJ4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
VPS13DQ5THJ4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC14.27□□□□□ -0.13
VPS13DQ5THJ4 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VPS13DQ5THJ4 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.13
VPS13DQ5THJ4 RCN1P1-201ENST00000400413 996 ntBASIC14.27□□□□□ -0.13
VPS13DQ5THJ4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VPS13DQ5THJ4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC14.27□□□□□ -0.13
VPS13DQ5THJ4 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC14.26□□□□□ -0.13
VPS13DQ5THJ4 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC14.26□□□□□ -0.13
VPS13DQ5THJ4 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
VPS13DQ5THJ4 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VPS13DQ5THJ4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
VPS13DQ5THJ4 UBE2SP1-201ENST00000450587 669 ntBASIC14.26□□□□□ -0.13
VPS13DQ5THJ4 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VPS13DQ5THJ4 VMO1-204ENST00000441199 741 ntTSL 2 BASIC14.26□□□□□ -0.13
VPS13DQ5THJ4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC14.26□□□□□ -0.13
VPS13DQ5THJ4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
VPS13DQ5THJ4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VPS13DQ5THJ4 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VPS13DQ5THJ4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VPS13DQ5THJ4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC14.26□□□□□ -0.13
VPS13DQ5THJ4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC14.26□□□□□ -0.13
VPS13DQ5THJ4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
VPS13DQ5THJ4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VPS13DQ5THJ4 RPPH1-201ENST00000516869 333 ntBASIC14.25□□□□□ -0.13
VPS13DQ5THJ4 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC14.25□□□□□ -0.13
VPS13DQ5THJ4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VPS13DQ5THJ4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
VPS13DQ5THJ4 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC14.25□□□□□ -0.13
VPS13DQ5THJ4 AC026471.6-201ENST00000622954 1905 ntBASIC14.25□□□□□ -0.13
VPS13DQ5THJ4 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC14.25□□□□□ -0.13
VPS13DQ5THJ4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC14.25□□□□□ -0.13
VPS13DQ5THJ4 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VPS13DQ5THJ4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VPS13DQ5THJ4 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VPS13DQ5THJ4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VPS13DQ5THJ4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
VPS13DQ5THJ4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
VPS13DQ5THJ4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
VPS13DQ5THJ4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC14.25□□□□□ -0.13
VPS13DQ5THJ4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
VPS13DQ5THJ4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VPS13DQ5THJ4 GATS-209ENST00000454084 1030 ntTSL 3 BASIC14.25□□□□□ -0.13
VPS13DQ5THJ4 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VPS13DQ5THJ4 SOX15-203ENST00000570788 1093 ntBASIC14.25□□□□□ -0.13
VPS13DQ5THJ4 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC14.25□□□□□ -0.13
VPS13DQ5THJ4 AC012306.2-201ENST00000609350 630 ntBASIC14.25□□□□□ -0.13
VPS13DQ5THJ4 HLA-B-256ENST00000639848 1089 ntBASIC14.25□□□□□ -0.13
VPS13DQ5THJ4 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms