Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LDLRAP1Q5SW96 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
LDLRAP1Q5SW96 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.9■□□□□ 0.94
LDLRAP1Q5SW96 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.9■□□□□ 0.94
LDLRAP1Q5SW96 AP001160.3-201ENST00000601484 763 ntBASIC20.9■□□□□ 0.94
LDLRAP1Q5SW96 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LDLRAP1Q5SW96 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LDLRAP1Q5SW96 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LDLRAP1Q5SW96 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.9■□□□□ 0.94
LDLRAP1Q5SW96 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
LDLRAP1Q5SW96 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
LDLRAP1Q5SW96 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
LDLRAP1Q5SW96 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LDLRAP1Q5SW96 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
LDLRAP1Q5SW96 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.89■□□□□ 0.94
LDLRAP1Q5SW96 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LDLRAP1Q5SW96 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LDLRAP1Q5SW96 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LDLRAP1Q5SW96 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LDLRAP1Q5SW96 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LDLRAP1Q5SW96 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.89■□□□□ 0.93
LDLRAP1Q5SW96 AC008175.2-201ENST00000612840 297 ntBASIC20.89■□□□□ 0.93
LDLRAP1Q5SW96 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.89■□□□□ 0.93
LDLRAP1Q5SW96 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LDLRAP1Q5SW96 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
LDLRAP1Q5SW96 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
LDLRAP1Q5SW96 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LDLRAP1Q5SW96 FBXW4P1-201ENST00000426721 2239 ntBASIC20.89■□□□□ 0.93
LDLRAP1Q5SW96 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
LDLRAP1Q5SW96 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LDLRAP1Q5SW96 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
LDLRAP1Q5SW96 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LDLRAP1Q5SW96 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LDLRAP1Q5SW96 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.88■□□□□ 0.93
LDLRAP1Q5SW96 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LDLRAP1Q5SW96 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.88■□□□□ 0.93
LDLRAP1Q5SW96 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LDLRAP1Q5SW96 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LDLRAP1Q5SW96 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
LDLRAP1Q5SW96 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LDLRAP1Q5SW96 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
LDLRAP1Q5SW96 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LDLRAP1Q5SW96 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.88■□□□□ 0.93
LDLRAP1Q5SW96 AC244015.2-201ENST00000616358 1861 ntBASIC20.88■□□□□ 0.93
LDLRAP1Q5SW96 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LDLRAP1Q5SW96 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LDLRAP1Q5SW96 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
LDLRAP1Q5SW96 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.87■□□□□ 0.93
LDLRAP1Q5SW96 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LDLRAP1Q5SW96 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LDLRAP1Q5SW96 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LDLRAP1Q5SW96 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LDLRAP1Q5SW96 POU5F1P4-201ENST00000413175 1085 ntBASIC20.87■□□□□ 0.93
LDLRAP1Q5SW96 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.87■□□□□ 0.93
LDLRAP1Q5SW96 KRT18P20-201ENST00000548986 1279 ntBASIC20.87■□□□□ 0.93
LDLRAP1Q5SW96 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
LDLRAP1Q5SW96 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.87■□□□□ 0.93
LDLRAP1Q5SW96 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LDLRAP1Q5SW96 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LDLRAP1Q5SW96 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LDLRAP1Q5SW96 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LDLRAP1Q5SW96 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
LDLRAP1Q5SW96 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LDLRAP1Q5SW96 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LDLRAP1Q5SW96 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.87■□□□□ 0.93
LDLRAP1Q5SW96 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.86■□□□□ 0.93
LDLRAP1Q5SW96 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LDLRAP1Q5SW96 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LDLRAP1Q5SW96 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LDLRAP1Q5SW96 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LDLRAP1Q5SW96 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.86■□□□□ 0.93
LDLRAP1Q5SW96 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LDLRAP1Q5SW96 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.86■□□□□ 0.93
LDLRAP1Q5SW96 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.86■□□□□ 0.93
LDLRAP1Q5SW96 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.86■□□□□ 0.93
LDLRAP1Q5SW96 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LDLRAP1Q5SW96 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.86■□□□□ 0.93
LDLRAP1Q5SW96 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.86■□□□□ 0.93
LDLRAP1Q5SW96 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.86■□□□□ 0.93
LDLRAP1Q5SW96 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LDLRAP1Q5SW96 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LDLRAP1Q5SW96 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
LDLRAP1Q5SW96 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
LDLRAP1Q5SW96 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
LDLRAP1Q5SW96 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.85■□□□□ 0.93
LDLRAP1Q5SW96 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.85■□□□□ 0.93
LDLRAP1Q5SW96 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LDLRAP1Q5SW96 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LDLRAP1Q5SW96 AC137761.2-201ENST00000561729 223 ntBASIC20.85■□□□□ 0.93
LDLRAP1Q5SW96 AC145350.3-201ENST00000569033 163 ntBASIC20.85■□□□□ 0.93
LDLRAP1Q5SW96 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LDLRAP1Q5SW96 AC022517.1-201ENST00000592429 346 ntBASIC20.85■□□□□ 0.93
LDLRAP1Q5SW96 AC120498.10-201ENST00000621827 505 ntBASIC20.85■□□□□ 0.93
LDLRAP1Q5SW96 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.85■□□□□ 0.93
LDLRAP1Q5SW96 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.85■□□□□ 0.93
LDLRAP1Q5SW96 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
LDLRAP1Q5SW96 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LDLRAP1Q5SW96 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LDLRAP1Q5SW96 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LDLRAP1Q5SW96 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms