Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 POM121L13P-201ENST00000422362 380 ntBASIC13.23□□□□□ -0.29
HSPG2P98160 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC13.23□□□□□ -0.29
HSPG2P98160 P4HB-223ENST00000576390 439 ntTSL 4 BASIC13.23□□□□□ -0.29
HSPG2P98160 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HSPG2P98160 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HSPG2P98160 GCK-205ENST00000437084 1385 ntTSL 5 BASIC13.23□□□□□ -0.29
HSPG2P98160 KRT8P9-201ENST00000558927 1449 ntBASIC13.23□□□□□ -0.29
HSPG2P98160 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HSPG2P98160 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC13.23□□□□□ -0.29
HSPG2P98160 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HSPG2P98160 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
HSPG2P98160 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC13.23□□□□□ -0.29
HSPG2P98160 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HSPG2P98160 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HSPG2P98160 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HSPG2P98160 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HSPG2P98160 ISG20-202ENST00000379224 540 ntTSL 3 BASIC13.23□□□□□ -0.29
HSPG2P98160 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC13.23□□□□□ -0.29
HSPG2P98160 RMI2-205ENST00000576027 818 ntTSL 2 BASIC13.23□□□□□ -0.29
HSPG2P98160 AC113410.3-201ENST00000623366 203 ntBASIC13.23□□□□□ -0.29
HSPG2P98160 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HSPG2P98160 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HSPG2P98160 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC13.23□□□□□ -0.29
HSPG2P98160 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC13.23□□□□□ -0.29
HSPG2P98160 PRKY-204ENST00000533551 1019 ntBASIC13.23□□□□□ -0.29
HSPG2P98160 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC13.23□□□□□ -0.29
HSPG2P98160 RARRES2P10-201ENST00000564312 460 ntBASIC13.23□□□□□ -0.29
HSPG2P98160 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
HSPG2P98160 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
HSPG2P98160 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HSPG2P98160 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC13.22□□□□□ -0.29
HSPG2P98160 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC13.22□□□□□ -0.29
HSPG2P98160 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC13.22□□□□□ -0.29
HSPG2P98160 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC13.22□□□□□ -0.29
HSPG2P98160 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HSPG2P98160 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
HSPG2P98160 AC100791.3-201ENST00000617619 330 ntBASIC13.22□□□□□ -0.29
HSPG2P98160 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC13.22□□□□□ -0.29
HSPG2P98160 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
HSPG2P98160 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
HSPG2P98160 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC13.22□□□□□ -0.29
HSPG2P98160 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC13.22□□□□□ -0.29
HSPG2P98160 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
HSPG2P98160 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
HSPG2P98160 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
HSPG2P98160 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
HSPG2P98160 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HSPG2P98160 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HSPG2P98160 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HSPG2P98160 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HSPG2P98160 AC005521.1-201ENST00000393351 872 ntBASIC13.22□□□□□ -0.29
HSPG2P98160 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HSPG2P98160 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
HSPG2P98160 AL049597.2-201ENST00000565575 961 ntBASIC13.22□□□□□ -0.29
HSPG2P98160 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
HSPG2P98160 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HSPG2P98160 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC13.21□□□□□ -0.29
HSPG2P98160 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC13.21□□□□□ -0.29
HSPG2P98160 PENK-204ENST00000518770 863 ntTSL 2 BASIC13.21□□□□□ -0.29
HSPG2P98160 LY6E-205ENST00000519611 635 ntTSL 3 BASIC13.21□□□□□ -0.29
HSPG2P98160 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
HSPG2P98160 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HSPG2P98160 NME3-204ENST00000563498 920 ntTSL 2 BASIC13.21□□□□□ -0.29
HSPG2P98160 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
HSPG2P98160 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HSPG2P98160 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HSPG2P98160 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
HSPG2P98160 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HSPG2P98160 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
HSPG2P98160 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
HSPG2P98160 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HSPG2P98160 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
HSPG2P98160 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HSPG2P98160 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HSPG2P98160 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HSPG2P98160 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
HSPG2P98160 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC13.21□□□□□ -0.3
HSPG2P98160 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HSPG2P98160 AC239809.2-201ENST00000415381 517 ntBASIC13.21□□□□□ -0.3
HSPG2P98160 HES2-205ENST00000487437 968 ntTSL 3 BASIC13.21□□□□□ -0.3
HSPG2P98160 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC13.21□□□□□ -0.3
HSPG2P98160 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
HSPG2P98160 AC053503.5-201ENST00000601508 636 ntBASIC13.21□□□□□ -0.3
HSPG2P98160 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HSPG2P98160 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC13.2□□□□□ -0.3
HSPG2P98160 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
HSPG2P98160 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HSPG2P98160 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC13.2□□□□□ -0.3
HSPG2P98160 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
HSPG2P98160 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HSPG2P98160 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC13.2□□□□□ -0.3
HSPG2P98160 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC13.2□□□□□ -0.3
HSPG2P98160 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
HSPG2P98160 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HSPG2P98160 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HSPG2P98160 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC13.2□□□□□ -0.3
HSPG2P98160 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HSPG2P98160 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
HSPG2P98160 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC13.2□□□□□ -0.3
HSPG2P98160 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms