Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 ALB1YJL122W 528 nt2.45□□□□□ -2.02
SSU72P53538 GSP1YLR293C 660 nt2.45□□□□□ -2.02
SSU72P53538 SFH1YLR321C 1281 nt2.45□□□□□ -2.02
SSU72P53538 YLR365WYLR365W 333 nt2.45□□□□□ -2.02
SSU72P53538 DUN1YDL101C 1542 nt2.45□□□□□ -2.02
SSU72P53538 RED1YLR263W 2484 nt2.45□□□□□ -2.02
SSU72P53538 SST2YLR452C 2097 nt2.45□□□□□ -2.02
SSU72P53538 YDL050CYDL050C 372 nt2.44□□□□□ -2.02
SSU72P53538 SNU23YDL098C 585 nt2.44□□□□□ -2.02
SSU72P53538 YDR133CYDR133C 336 nt2.44□□□□□ -2.02
SSU72P53538 GIC2YDR309C 1152 nt2.44□□□□□ -2.02
SSU72P53538 TCA17YEL048C 459 nt2.44□□□□□ -2.02
SSU72P53538 YGL177WYGL177W 348 nt2.44□□□□□ -2.02
SSU72P53538 TAN1YGL232W 870 nt2.44□□□□□ -2.02
SSU72P53538 YGR017WYGR017W 894 nt2.44□□□□□ -2.02
SSU72P53538 RPS25AYGR027C 327 nt2.44□□□□□ -2.02
SSU72P53538 YGR190CYGR190C 366 nt2.44□□□□□ -2.02
SSU72P53538 PFS1YHR185C 714 nt2.44□□□□□ -2.02
SSU72P53538 PPX1YHR201C 1194 nt2.44□□□□□ -2.02
SSU72P53538 YHR213WYHR213W 597 nt2.44□□□□□ -2.02
SSU72P53538 AIM23YJL131C 1071 nt2.44□□□□□ -2.02
SSU72P53538 YAR062WYAR062W 597 nt2.44□□□□□ -2.02
SSU72P53538 GLO1YML004C 981 nt2.44□□□□□ -2.02
SSU72P53538 YBL039W-BYBL039W-B 180 nt2.44□□□□□ -2.02
SSU72P53538 YOR073W-AYOR073W-A 234 nt2.44□□□□□ -2.02
SSU72P53538 FIG1YBR040W 897 nt2.44□□□□□ -2.02
SSU72P53538 YBR292CYBR292C 372 nt2.44□□□□□ -2.02
SSU72P53538 RDS2YPL133C 1341 nt2.43□□□□□ -2.02
SSU72P53538 EXO70YJL085W 1872 nt2.43□□□□□ -2.02
SSU72P53538 TFC4YGR047C 3078 nt2.43□□□□□ -2.02
SSU72P53538 PFF1YBR074W 2931 nt2.43□□□□□ -2.02
SSU72P53538 SKO1YNL167C 1944 nt2.43□□□□□ -2.02
SSU72P53538 PMR1YGL167C 2853 nt2.43□□□□□ -2.02
SSU72P53538 FAR11YNL127W 2862 nt2.43□□□□□ -2.02
SSU72P53538 DTD1YDL219W 453 nt2.43□□□□□ -2.02
SSU72P53538 YEL075CYEL075C 369 nt2.43□□□□□ -2.02
SSU72P53538 THP2YHR167W 786 nt2.43□□□□□ -2.02
SSU72P53538 YLR290CYLR290C 834 nt2.43□□□□□ -2.02
SSU72P53538 RPS1AYLR441C 768 nt2.43□□□□□ -2.02
SSU72P53538 YML094C-AYML094C-A 402 nt2.43□□□□□ -2.02
SSU72P53538 YBR013CYBR013C 390 nt2.43□□□□□ -2.02
SSU72P53538 IRC13YOR235W 315 nt2.43□□□□□ -2.02
SSU72P53538 RPS10AYOR293W 318 nt2.43□□□□□ -2.02
SSU72P53538 PIN3YPR154W 648 nt2.43□□□□□ -2.02
SSU72P53538 ATG13YPR185W 2217 nt2.43□□□□□ -2.02
SSU72P53538 NSA1YGL111W 1392 nt2.43□□□□□ -2.02
SSU72P53538 CSF1YLR087C 8877 nt2.43□□□□□ -2.02
SSU72P53538 RIM13YMR154C 2184 nt2.43□□□□□ -2.02
SSU72P53538 KRE33YNL132W 3171 nt2.43□□□□□ -2.02
SSU72P53538 YNR066CYNR066C 1311 nt2.42□□□□□ -2.02
SSU72P53538 FIR1YER032W 2631 nt2.42□□□□□ -2.02
SSU72P53538 AI2Q0055 2565 nt2.42□□□□□ -2.02
SSU72P53538 PHO2YDL106C 1680 nt2.42□□□□□ -2.02
SSU72P53538 TMA64YDR117C 1698 nt2.42□□□□□ -2.02
SSU72P53538 MRPL32YCR003W 552 nt2.42□□□□□ -2.02
SSU72P53538 RRP42YDL111C 798 nt2.42□□□□□ -2.02
SSU72P53538 SHR3YDL212W 633 nt2.42□□□□□ -2.02
SSU72P53538 HTD2YHR067W 843 nt2.42□□□□□ -2.02
SSU72P53538 YIL024CYIL024C 570 nt2.42□□□□□ -2.02
SSU72P53538 FYV6YNL133C 522 nt2.42□□□□□ -2.02
SSU72P53538 YNR062CYNR062C 984 nt2.42□□□□□ -2.02
SSU72P53538 PPT2YPL148C 522 nt2.42□□□□□ -2.02
SSU72P53538 RRD2YPL152W 1077 nt2.42□□□□□ -2.02
SSU72P53538 CCL1YPR025C 1182 nt2.42□□□□□ -2.02
SSU72P53538 ARO4YBR249C 1113 nt2.42□□□□□ -2.02
SSU72P53538 SAK1YER129W 3429 nt2.42□□□□□ -2.02
SSU72P53538 PSD2YGR170W 3417 nt2.42□□□□□ -2.02
SSU72P53538 DUG2YBR281C 2637 nt2.42□□□□□ -2.02
SSU72P53538 YDR210W-BYDR210W-B 5313 nt2.42□□□□□ -2.02
SSU72P53538 YLR410W-BYLR410W-B 5313 nt2.42□□□□□ -2.02
SSU72P53538 YNL011CYNL011C 1335 nt2.42□□□□□ -2.02
SSU72P53538 YDR261W-BYDR261W-B 5313 nt2.41□□□□□ -2.02
SSU72P53538 YFL002W-AYFL002W-A 5313 nt2.41□□□□□ -2.02
SSU72P53538 YGR161W-BYGR161W-B 5313 nt2.41□□□□□ -2.02
SSU72P53538 YCL019WYCL019W 5313 nt2.41□□□□□ -2.02
SSU72P53538 ENP2YGR145W 2124 nt2.41□□□□□ -2.02
SSU72P53538 TRA1YHR099W 11235 nt2.41□□□□□ -2.02
SSU72P53538 VPS25YJR102C 609 nt2.41□□□□□ -2.02
SSU72P53538 BOS1YLR078C 735 nt2.41□□□□□ -2.02
SSU72P53538 RDN58-1RDN58-1 158 nt2.41□□□□□ -2.02
SSU72P53538 RPS29AYLR388W 171 nt2.41□□□□□ -2.02
SSU72P53538 RDN58-2RDN58-2 158 nt2.41□□□□□ -2.02
SSU72P53538 YPL107WYPL107W 747 nt2.41□□□□□ -2.02
SSU72P53538 PRM4YPL156C 855 nt2.41□□□□□ -2.02
SSU72P53538 APD1YBR151W 951 nt2.41□□□□□ -2.02
SSU72P53538 MUS81YDR386W 1899 nt2.41□□□□□ -2.02
SSU72P53538 PEX6YNL329C 3093 nt2.4□□□□□ -2.02
SSU72P53538 PKP2YGL059W 1476 nt2.4□□□□□ -2.02
SSU72P53538 TRS130YMR218C 3309 nt2.4□□□□□ -2.03
SSU72P53538 YGR064WYGR064W 369 nt2.4□□□□□ -2.03
SSU72P53538 TDA10YGR205W 873 nt2.4□□□□□ -2.03
SSU72P53538 YGR270C-AYGR270C-A 219 nt2.4□□□□□ -2.03
SSU72P53538 OTU2YHL013C 924 nt2.4□□□□□ -2.03
SSU72P53538 UFE1YOR075W 1041 nt2.4□□□□□ -2.03
SSU72P53538 YBR116CYBR116C 528 nt2.4□□□□□ -2.03
SSU72P53538 SNT1YCR033W 3681 nt2.4□□□□□ -2.03
SSU72P53538 MEI4YER044C-A 1227 nt2.39□□□□□ -2.03
SSU72P53538 RTT105YER104W 627 nt2.39□□□□□ -2.03
SSU72P53538 YHR180WYHR180W 492 nt2.39□□□□□ -2.03
SSU72P53538 MET14YKL001C 609 nt2.39□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 23.1 ms