Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RFX3P48380 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RFX3P48380 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFX3P48380 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFX3P48380 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.67■□□□□ 0.74
RFX3P48380 AC244015.2-201ENST00000616358 1861 ntBASIC19.67■□□□□ 0.74
RFX3P48380 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFX3P48380 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.67■□□□□ 0.74
RFX3P48380 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.67■□□□□ 0.74
RFX3P48380 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.67■□□□□ 0.74
RFX3P48380 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RFX3P48380 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RFX3P48380 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFX3P48380 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RFX3P48380 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFX3P48380 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RFX3P48380 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFX3P48380 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.66■□□□□ 0.74
RFX3P48380 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFX3P48380 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFX3P48380 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFX3P48380 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFX3P48380 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFX3P48380 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFX3P48380 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFX3P48380 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RFX3P48380 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RFX3P48380 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFX3P48380 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RFX3P48380 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RFX3P48380 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.66■□□□□ 0.74
RFX3P48380 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RFX3P48380 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.66■□□□□ 0.74
RFX3P48380 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.66■□□□□ 0.74
RFX3P48380 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFX3P48380 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RFX3P48380 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RFX3P48380 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
RFX3P48380 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
RFX3P48380 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.65■□□□□ 0.74
RFX3P48380 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.65■□□□□ 0.74
RFX3P48380 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RFX3P48380 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RFX3P48380 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.65■□□□□ 0.74
RFX3P48380 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFX3P48380 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.65■□□□□ 0.74
RFX3P48380 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.65■□□□□ 0.74
RFX3P48380 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFX3P48380 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.65■□□□□ 0.74
RFX3P48380 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RFX3P48380 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RFX3P48380 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.65■□□□□ 0.74
RFX3P48380 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RFX3P48380 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RFX3P48380 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.65■□□□□ 0.74
RFX3P48380 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFX3P48380 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFX3P48380 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFX3P48380 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RFX3P48380 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RFX3P48380 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.64■□□□□ 0.74
RFX3P48380 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RFX3P48380 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.64■□□□□ 0.73
RFX3P48380 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.64■□□□□ 0.73
RFX3P48380 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RFX3P48380 AC055733.4-201ENST00000638462 1354 ntBASIC19.64■□□□□ 0.73
RFX3P48380 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RFX3P48380 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RFX3P48380 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RFX3P48380 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RFX3P48380 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RFX3P48380 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
RFX3P48380 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RFX3P48380 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RFX3P48380 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
RFX3P48380 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RFX3P48380 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RFX3P48380 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.63■□□□□ 0.73
RFX3P48380 Z98882.1-201ENST00000622160 2253 ntBASIC19.63■□□□□ 0.73
RFX3P48380 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFX3P48380 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RFX3P48380 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFX3P48380 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.63■□□□□ 0.73
RFX3P48380 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFX3P48380 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFX3P48380 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFX3P48380 AC019069.1-201ENST00000610008 1333 ntBASIC19.63■□□□□ 0.73
RFX3P48380 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
RFX3P48380 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RFX3P48380 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RFX3P48380 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.63■□□□□ 0.73
RFX3P48380 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.63■□□□□ 0.73
RFX3P48380 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
RFX3P48380 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFX3P48380 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFX3P48380 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFX3P48380 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RFX3P48380 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFX3P48380 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFX3P48380 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms