Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
COL8A2P25067 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
COL8A2P25067 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.79■□□□□ 0.44
COL8A2P25067 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL8A2P25067 AC010542.4-201ENST00000563151 1910 ntBASIC17.78■□□□□ 0.44
COL8A2P25067 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
COL8A2P25067 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
COL8A2P25067 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
COL8A2P25067 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
COL8A2P25067 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
COL8A2P25067 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
COL8A2P25067 CNN2P6-201ENST00000439038 900 ntBASIC17.78■□□□□ 0.44
COL8A2P25067 TERF1P5-201ENST00000477545 1207 ntBASIC17.78■□□□□ 0.44
COL8A2P25067 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.78■□□□□ 0.44
COL8A2P25067 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.78■□□□□ 0.44
COL8A2P25067 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL8A2P25067 AC104771.1-201ENST00000603335 964 ntBASIC17.78■□□□□ 0.44
COL8A2P25067 AC005181.1-201ENST00000604782 1256 ntBASIC17.78■□□□□ 0.44
COL8A2P25067 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
COL8A2P25067 AL050303.2-201ENST00000619798 666 ntBASIC17.78■□□□□ 0.44
COL8A2P25067 AC120498.10-201ENST00000621827 505 ntBASIC17.78■□□□□ 0.44
COL8A2P25067 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
COL8A2P25067 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
COL8A2P25067 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
COL8A2P25067 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL8A2P25067 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL8A2P25067 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL8A2P25067 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COL8A2P25067 FAM99A-202ENST00000538190 1989 ntBASIC17.77■□□□□ 0.44
COL8A2P25067 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL8A2P25067 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
COL8A2P25067 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL8A2P25067 GPX1P1-201ENST00000388829 606 ntBASIC17.77■□□□□ 0.44
COL8A2P25067 POU5F1P4-201ENST00000413175 1085 ntBASIC17.77■□□□□ 0.44
COL8A2P25067 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COL8A2P25067 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL8A2P25067 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COL8A2P25067 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.77■□□□□ 0.43
COL8A2P25067 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
COL8A2P25067 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.77■□□□□ 0.43
COL8A2P25067 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
COL8A2P25067 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.76■□□□□ 0.43
COL8A2P25067 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL8A2P25067 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.76■□□□□ 0.43
COL8A2P25067 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.76■□□□□ 0.43
COL8A2P25067 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL8A2P25067 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL8A2P25067 AC061975.6-201ENST00000579045 1553 ntBASIC17.76■□□□□ 0.43
COL8A2P25067 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL8A2P25067 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL8A2P25067 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.76■□□□□ 0.43
COL8A2P25067 AC083906.2-201ENST00000511578 360 ntBASIC17.76■□□□□ 0.43
COL8A2P25067 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.76■□□□□ 0.43
COL8A2P25067 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL8A2P25067 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL8A2P25067 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.76■□□□□ 0.43
COL8A2P25067 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.76■□□□□ 0.43
COL8A2P25067 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL8A2P25067 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.75■□□□□ 0.43
COL8A2P25067 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL8A2P25067 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.75■□□□□ 0.43
COL8A2P25067 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.75■□□□□ 0.43
COL8A2P25067 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.75■□□□□ 0.43
COL8A2P25067 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.75■□□□□ 0.43
COL8A2P25067 AL121832.2-201ENST00000610979 668 ntBASIC17.75■□□□□ 0.43
COL8A2P25067 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL8A2P25067 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL8A2P25067 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL8A2P25067 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
COL8A2P25067 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.75■□□□□ 0.43
COL8A2P25067 AC242852.2-201ENST00000615738 1807 ntBASIC17.75■□□□□ 0.43
COL8A2P25067 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL8A2P25067 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL8A2P25067 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.74■□□□□ 0.43
COL8A2P25067 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
COL8A2P25067 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL8A2P25067 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL8A2P25067 GUSBP5-202ENST00000510805 1989 ntBASIC17.74■□□□□ 0.43
COL8A2P25067 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.74■□□□□ 0.43
COL8A2P25067 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.74■□□□□ 0.43
COL8A2P25067 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL8A2P25067 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL8A2P25067 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL8A2P25067 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.74■□□□□ 0.43
COL8A2P25067 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL8A2P25067 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
COL8A2P25067 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
COL8A2P25067 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.74■□□□□ 0.43
COL8A2P25067 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL8A2P25067 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.74■□□□□ 0.43
COL8A2P25067 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL8A2P25067 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL8A2P25067 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
COL8A2P25067 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
COL8A2P25067 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL8A2P25067 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
COL8A2P25067 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.73■□□□□ 0.43
COL8A2P25067 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.73■□□□□ 0.43
COL8A2P25067 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.73■□□□□ 0.43
COL8A2P25067 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms