Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
KCNA3P22001 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
KCNA3P22001 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC26.1■■□□□ 1.77
KCNA3P22001 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC26.1■■□□□ 1.77
KCNA3P22001 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
KCNA3P22001 AC091799.1-201ENST00000422823 811 ntBASIC26.1■■□□□ 1.77
KCNA3P22001 REXO2-216ENST00000544196 452 ntTSL 3 BASIC26.1■■□□□ 1.77
KCNA3P22001 AC233702.5-201ENST00000584107 538 ntBASIC26.1■■□□□ 1.77
KCNA3P22001 AC092368.3-202ENST00000574180 1591 ntBASIC26.1■■□□□ 1.77
KCNA3P22001 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC26.1■■□□□ 1.77
KCNA3P22001 RARG-204ENST00000543726 1779 ntTSL 2 BASIC26.1■■□□□ 1.77
KCNA3P22001 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
KCNA3P22001 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC26.09■■□□□ 1.77
KCNA3P22001 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
KCNA3P22001 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
KCNA3P22001 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
KCNA3P22001 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC26.09■■□□□ 1.77
KCNA3P22001 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
KCNA3P22001 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC26.09■■□□□ 1.77
KCNA3P22001 TSPY7P-201ENST00000431358 1114 ntBASIC26.09■■□□□ 1.77
KCNA3P22001 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC26.09■■□□□ 1.77
KCNA3P22001 TSPY15P-201ENST00000457163 923 ntBASIC26.09■■□□□ 1.77
KCNA3P22001 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
KCNA3P22001 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC26.09■■□□□ 1.77
KCNA3P22001 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
KCNA3P22001 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
KCNA3P22001 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
KCNA3P22001 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC26.09■■□□□ 1.77
KCNA3P22001 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC26.09■■□□□ 1.77
KCNA3P22001 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
KCNA3P22001 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
KCNA3P22001 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
KCNA3P22001 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
KCNA3P22001 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
KCNA3P22001 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
KCNA3P22001 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
KCNA3P22001 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
KCNA3P22001 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
KCNA3P22001 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC26.08■■□□□ 1.77
KCNA3P22001 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
KCNA3P22001 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC26.08■■□□□ 1.77
KCNA3P22001 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
KCNA3P22001 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
KCNA3P22001 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
KCNA3P22001 ANOS2P-203ENST00000472227 1816 ntBASIC26.07■■□□□ 1.76
KCNA3P22001 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC26.07■■□□□ 1.76
KCNA3P22001 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
KCNA3P22001 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC26.07■■□□□ 1.76
KCNA3P22001 RPS2P55-201ENST00000397318 883 ntBASIC26.07■■□□□ 1.76
KCNA3P22001 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC26.07■■□□□ 1.76
KCNA3P22001 AC012618.2-201ENST00000428058 849 ntBASIC26.07■■□□□ 1.76
KCNA3P22001 AC107956.1-201ENST00000494359 873 ntBASIC26.07■■□□□ 1.76
KCNA3P22001 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC26.07■■□□□ 1.76
KCNA3P22001 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC26.07■■□□□ 1.76
KCNA3P22001 KLF2-202ENST00000592003 564 ntTSL 3 BASIC26.07■■□□□ 1.76
KCNA3P22001 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
KCNA3P22001 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
KCNA3P22001 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
KCNA3P22001 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC26.06■■□□□ 1.76
KCNA3P22001 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
KCNA3P22001 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
KCNA3P22001 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
KCNA3P22001 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
KCNA3P22001 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC26.06■■□□□ 1.76
KCNA3P22001 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC26.06■■□□□ 1.76
KCNA3P22001 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
KCNA3P22001 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
KCNA3P22001 SOX15-203ENST00000570788 1093 ntBASIC26.06■■□□□ 1.76
KCNA3P22001 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
KCNA3P22001 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC26.06■■□□□ 1.76
KCNA3P22001 AC012306.2-201ENST00000609350 630 ntBASIC26.06■■□□□ 1.76
KCNA3P22001 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
KCNA3P22001 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
KCNA3P22001 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
KCNA3P22001 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC26.06■■□□□ 1.76
KCNA3P22001 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
KCNA3P22001 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.06■■□□□ 1.76
KCNA3P22001 AC092068.2-201ENST00000590491 1708 ntBASIC26.05■■□□□ 1.76
KCNA3P22001 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
KCNA3P22001 RCN1P1-201ENST00000400413 996 ntBASIC26.05■■□□□ 1.76
KCNA3P22001 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.05■■□□□ 1.76
KCNA3P22001 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
KCNA3P22001 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
KCNA3P22001 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
KCNA3P22001 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
KCNA3P22001 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
KCNA3P22001 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
KCNA3P22001 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC26.04■■□□□ 1.76
KCNA3P22001 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
KCNA3P22001 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
KCNA3P22001 AC020928.2-201ENST00000588717 2197 ntBASIC26.03■■□□□ 1.76
KCNA3P22001 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
KCNA3P22001 ISG20-202ENST00000379224 540 ntTSL 3 BASIC26.03■■□□□ 1.76
KCNA3P22001 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
KCNA3P22001 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC26.03■■□□□ 1.76
KCNA3P22001 TK2-213ENST00000563369 882 ntTSL 5 BASIC26.03■■□□□ 1.76
KCNA3P22001 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC26.03■■□□□ 1.76
KCNA3P22001 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
KCNA3P22001 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC26.03■■□□□ 1.76
KCNA3P22001 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC26.03■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms