Protein–RNA interactions for Protein: P18898

CDC43, Geranylgeranyl transferase type-1 subunit beta, yeastyeast

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC43P18898 BCH2YKR027W 2298 nt3.6□□□□□ -1.83
CDC43P18898 SSF2YDR312W 1362 nt3.6□□□□□ -1.83
CDC43P18898 GDI1YER136W 1356 nt3.6□□□□□ -1.83
CDC43P18898 BUD6YLR319C 2367 nt3.6□□□□□ -1.83
CDC43P18898 SEN54YPL083C 1404 nt3.6□□□□□ -1.83
CDC43P18898 FLC1YPL221W 2382 nt3.6□□□□□ -1.83
CDC43P18898 PAM1YDR251W 2493 nt3.6□□□□□ -1.83
CDC43P18898 STB2YMR053C 2553 nt3.59□□□□□ -1.83
CDC43P18898 PGS1YCL004W 1566 nt3.59□□□□□ -1.83
CDC43P18898 SEC2YNL272C 2280 nt3.59□□□□□ -1.83
CDC43P18898 YDL034WYDL034W 345 nt3.59□□□□□ -1.83
CDC43P18898 PCL5YHR071W 690 nt3.59□□□□□ -1.83
CDC43P18898 MAM33YIL070C 801 nt3.59□□□□□ -1.83
CDC43P18898 YKL068W-AYKL068W-A 237 nt3.59□□□□□ -1.83
CDC43P18898 ISA1YLL027W 753 nt3.59□□□□□ -1.83
CDC43P18898 YMR304C-AYMR304C-A 351 nt3.59□□□□□ -1.83
CDC43P18898 SEC27YGL137W 2670 nt3.59□□□□□ -1.83
CDC43P18898 HUL4YJR036C 2679 nt3.59□□□□□ -1.83
CDC43P18898 SKM1YOL113W 1968 nt3.58□□□□□ -1.84
CDC43P18898 YDR537CYDR537C 606 nt3.58□□□□□ -1.84
CDC43P18898 SMB1YER029C 591 nt3.58□□□□□ -1.84
CDC43P18898 SAE3YHR079C-A 276 nt3.58□□□□□ -1.84
CDC43P18898 GPP1YIL053W 753 nt3.58□□□□□ -1.84
CDC43P18898 YKL118WYKL118W 312 nt3.58□□□□□ -1.84
CDC43P18898 YKL151CYKL151C 1014 nt3.58□□□□□ -1.84
CDC43P18898 BUD28YLR062C 378 nt3.58□□□□□ -1.84
CDC43P18898 YLR434CYLR434C 384 nt3.58□□□□□ -1.84
CDC43P18898 YOR200WYOR200W 399 nt3.58□□□□□ -1.84
CDC43P18898 YOR282WYOR282W 321 nt3.58□□□□□ -1.84
CDC43P18898 AFT2YPL202C 1251 nt3.58□□□□□ -1.84
CDC43P18898 GAL11YOL051W 3246 nt3.58□□□□□ -1.84
CDC43P18898 GMC1YDR506C 1827 nt3.58□□□□□ -1.84
CDC43P18898 YPK9YOR291W 4419 nt3.57□□□□□ -1.84
CDC43P18898 YFL064CYFL064C 525 nt3.57□□□□□ -1.84
CDC43P18898 PKP2YGL059W 1476 nt3.57□□□□□ -1.84
CDC43P18898 LIF1YGL090W 1266 nt3.57□□□□□ -1.84
CDC43P18898 YGR153WYGR153W 654 nt3.57□□□□□ -1.84
CDC43P18898 YML009C-AYML009C-A 327 nt3.57□□□□□ -1.84
CDC43P18898 BET5YML077W 480 nt3.57□□□□□ -1.84
CDC43P18898 YMR141CYMR141C 309 nt3.57□□□□□ -1.84
CDC43P18898 YNL184CYNL184C 327 nt3.57□□□□□ -1.84
CDC43P18898 IST1YNL265C 897 nt3.57□□□□□ -1.84
CDC43P18898 IRC16YPR038W 360 nt3.57□□□□□ -1.84
CDC43P18898 SWI1YPL016W 3945 nt3.57□□□□□ -1.84
CDC43P18898 RSC30YHR056C 2652 nt3.57□□□□□ -1.84
CDC43P18898 HOS3YPL116W 2094 nt3.56□□□□□ -1.84
CDC43P18898 VHS3YOR054C 2025 nt3.56□□□□□ -1.84
CDC43P18898 SWC3YAL011W 1878 nt3.56□□□□□ -1.84
CDC43P18898 THI7YLR237W 1797 nt3.56□□□□□ -1.84
CDC43P18898 PPQ1YPL179W 1650 nt3.56□□□□□ -1.84
CDC43P18898 OST1YJL002C 1431 nt3.56□□□□□ -1.84
CDC43P18898 RPS14AYCR031C 414 nt3.56□□□□□ -1.84
CDC43P18898 IRC2YDR112W 309 nt3.56□□□□□ -1.84
CDC43P18898 EMI1YDR512C 564 nt3.56□□□□□ -1.84
CDC43P18898 IRC18YJL037W 675 nt3.56□□□□□ -1.84
CDC43P18898 YLR076CYLR076C 423 nt3.56□□□□□ -1.84
CDC43P18898 YLR269CYLR269C 351 nt3.56□□□□□ -1.84
CDC43P18898 HAA1YPR008W 2085 nt3.56□□□□□ -1.84
CDC43P18898 FUI1YBL042C 1920 nt3.56□□□□□ -1.84
CDC43P18898 NUG1YER006W 1563 nt3.55□□□□□ -1.84
CDC43P18898 AVT7YIL088C 1473 nt3.55□□□□□ -1.84
CDC43P18898 IKS1YJL057C 2004 nt3.55□□□□□ -1.84
CDC43P18898 SYF1YDR416W 2580 nt3.55□□□□□ -1.84
CDC43P18898 YCR090CYCR090C 549 nt3.55□□□□□ -1.84
CDC43P18898 MRP17YKL003C 396 nt3.55□□□□□ -1.84
CDC43P18898 PBA1YLR199C 831 nt3.55□□□□□ -1.84
CDC43P18898 RIM9YMR063W 720 nt3.55□□□□□ -1.84
CDC43P18898 DAL82YNL314W 768 nt3.55□□□□□ -1.84
CDC43P18898 VAM10YOR068C 345 nt3.55□□□□□ -1.84
CDC43P18898 YNR063WYNR063W 1824 nt3.55□□□□□ -1.84
CDC43P18898 ALG6YOR002W 1635 nt3.55□□□□□ -1.84
CDC43P18898 CDC55YGL190C 1581 nt3.55□□□□□ -1.84
CDC43P18898 CBF5YLR175W 1452 nt3.54□□□□□ -1.84
CDC43P18898 HOYDL227C 1761 nt3.54□□□□□ -1.84
CDC43P18898 MRPL11YDL202W 750 nt3.54□□□□□ -1.84
CDC43P18898 GCN4YEL009C 846 nt3.54□□□□□ -1.84
CDC43P18898 YHR052W-AYHR052W-A 195 nt3.54□□□□□ -1.84
CDC43P18898 YHR054W-AYHR054W-A 195 nt3.54□□□□□ -1.84
CDC43P18898 MCM22YJR135C 720 nt3.54□□□□□ -1.84
CDC43P18898 COX8YLR395C 237 nt3.54□□□□□ -1.84
CDC43P18898 SAP30YMR263W 606 nt3.54□□□□□ -1.84
CDC43P18898 YNL043CYNL043C 321 nt3.54□□□□□ -1.84
CDC43P18898 ATX1YNL259C 222 nt3.54□□□□□ -1.84
CDC43P18898 CDC33YOL139C 642 nt3.54□□□□□ -1.84
CDC43P18898 SLK19YOR195W 2466 nt3.54□□□□□ -1.84
CDC43P18898 PEP7YDR323C 1548 nt3.54□□□□□ -1.84
CDC43P18898 PRP3YDR473C 1410 nt3.53□□□□□ -1.84
CDC43P18898 KCC4YCL024W 3114 nt3.53□□□□□ -1.84
CDC43P18898 SHS1YDL225W 1656 nt3.53□□□□□ -1.84
CDC43P18898 YER137W-AYER137W-A 306 nt3.53□□□□□ -1.84
CDC43P18898 YIL054WYIL054W 318 nt3.53□□□□□ -1.84
CDC43P18898 OAR1YKL055C 837 nt3.53□□□□□ -1.84
CDC43P18898 TEN1YLR010C 483 nt3.53□□□□□ -1.84
CDC43P18898 PNP1YLR209C 936 nt3.53□□□□□ -1.84
CDC43P18898 MBA1YBR185C 837 nt3.53□□□□□ -1.84
CDC43P18898 KEX1YGL203C 2190 nt3.52□□□□□ -1.85
CDC43P18898 YML096WYML096W 1578 nt3.52□□□□□ -1.85
CDC43P18898 OSH2YDL019C 3852 nt3.52□□□□□ -1.85
CDC43P18898 SRD1YCR018C 666 nt3.52□□□□□ -1.85
CDC43P18898 NHP2YDL208W 471 nt3.52□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 23 ms