Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
COL11A2P13942 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC26.08■■□□□ 1.76
COL11A2P13942 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC26.08■■□□□ 1.76
COL11A2P13942 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC26.07■■□□□ 1.76
COL11A2P13942 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
COL11A2P13942 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
COL11A2P13942 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
COL11A2P13942 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC26.07■■□□□ 1.76
COL11A2P13942 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC26.07■■□□□ 1.76
COL11A2P13942 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC26.07■■□□□ 1.76
COL11A2P13942 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
COL11A2P13942 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
COL11A2P13942 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
COL11A2P13942 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
COL11A2P13942 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
COL11A2P13942 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
COL11A2P13942 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
COL11A2P13942 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC26.06■■□□□ 1.76
COL11A2P13942 MDFI-202ENST00000373050 809 ntTSL 2 BASIC26.06■■□□□ 1.76
COL11A2P13942 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
COL11A2P13942 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
COL11A2P13942 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC26.06■■□□□ 1.76
COL11A2P13942 AC073912.3-201ENST00000624414 853 ntBASIC26.06■■□□□ 1.76
COL11A2P13942 HLA-B-256ENST00000639848 1089 ntBASIC26.06■■□□□ 1.76
COL11A2P13942 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
COL11A2P13942 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
COL11A2P13942 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC26.05■■□□□ 1.76
COL11A2P13942 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
COL11A2P13942 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
COL11A2P13942 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC26.05■■□□□ 1.76
COL11A2P13942 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
COL11A2P13942 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
COL11A2P13942 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
COL11A2P13942 SLC29A4P2-201ENST00000504749 1089 ntBASIC26.05■■□□□ 1.76
COL11A2P13942 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC26.05■■□□□ 1.76
COL11A2P13942 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
COL11A2P13942 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
COL11A2P13942 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC26.05■■□□□ 1.76
COL11A2P13942 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
COL11A2P13942 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
COL11A2P13942 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC26.04■■□□□ 1.76
COL11A2P13942 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC26.04■■□□□ 1.76
COL11A2P13942 ECEL1P3-201ENST00000427961 737 ntBASIC26.04■■□□□ 1.76
COL11A2P13942 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC26.04■■□□□ 1.76
COL11A2P13942 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
COL11A2P13942 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
COL11A2P13942 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC26.04■■□□□ 1.76
COL11A2P13942 AC092368.3-202ENST00000574180 1591 ntBASIC26.03■■□□□ 1.76
COL11A2P13942 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC26.03■■□□□ 1.76
COL11A2P13942 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
COL11A2P13942 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
COL11A2P13942 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
COL11A2P13942 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
COL11A2P13942 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
COL11A2P13942 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC26.02■■□□□ 1.76
COL11A2P13942 SNORA78-201ENST00000459373 127 ntBASIC26.02■■□□□ 1.76
COL11A2P13942 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
COL11A2P13942 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC26.02■■□□□ 1.76
COL11A2P13942 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
COL11A2P13942 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC26.02■■□□□ 1.76
COL11A2P13942 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
COL11A2P13942 SOX15-203ENST00000570788 1093 ntBASIC26.02■■□□□ 1.76
COL11A2P13942 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC26.02■■□□□ 1.76
COL11A2P13942 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC26.02■■□□□ 1.76
COL11A2P13942 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC26.01■■□□□ 1.75
COL11A2P13942 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
COL11A2P13942 GXYLT1P3-201ENST00000453058 1193 ntBASIC26.01■■□□□ 1.75
COL11A2P13942 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC26.01■■□□□ 1.75
COL11A2P13942 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
COL11A2P13942 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC26.01■■□□□ 1.75
COL11A2P13942 AC003102.1-202ENST00000563394 1796 ntBASIC26.01■■□□□ 1.75
COL11A2P13942 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC26.01■■□□□ 1.75
COL11A2P13942 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC26.01■■□□□ 1.75
COL11A2P13942 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC26.01■■□□□ 1.75
COL11A2P13942 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC26.01■■□□□ 1.75
COL11A2P13942 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC26■■□□□ 1.75
COL11A2P13942 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
COL11A2P13942 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
COL11A2P13942 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC26■■□□□ 1.75
COL11A2P13942 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
COL11A2P13942 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC26■■□□□ 1.75
COL11A2P13942 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
COL11A2P13942 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC26■■□□□ 1.75
COL11A2P13942 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC26■■□□□ 1.75
COL11A2P13942 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC26■■□□□ 1.75
COL11A2P13942 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC26■■□□□ 1.75
COL11A2P13942 MIR718-201ENST00000390190 70 ntBASIC26■■□□□ 1.75
COL11A2P13942 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC26■■□□□ 1.75
COL11A2P13942 AC100791.3-201ENST00000617619 330 ntBASIC26■■□□□ 1.75
COL11A2P13942 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
COL11A2P13942 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
COL11A2P13942 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
COL11A2P13942 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
COL11A2P13942 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
COL11A2P13942 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC25.99■■□□□ 1.75
COL11A2P13942 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
COL11A2P13942 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
COL11A2P13942 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
COL11A2P13942 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC25.98■■□□□ 1.75
COL11A2P13942 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms