Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
TMEM88BA6NKF7 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.83■■□□□ 1.57
TMEM88BA6NKF7 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
TMEM88BA6NKF7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
TMEM88BA6NKF7 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
TMEM88BA6NKF7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
TMEM88BA6NKF7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
TMEM88BA6NKF7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
TMEM88BA6NKF7 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
TMEM88BA6NKF7 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
TMEM88BA6NKF7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC24.82■■□□□ 1.56
TMEM88BA6NKF7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TMEM88BA6NKF7 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
TMEM88BA6NKF7 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC24.82■■□□□ 1.56
TMEM88BA6NKF7 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
TMEM88BA6NKF7 AL353708.3-201ENST00000610272 989 ntBASIC24.82■■□□□ 1.56
TMEM88BA6NKF7 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
TMEM88BA6NKF7 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
TMEM88BA6NKF7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
TMEM88BA6NKF7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TMEM88BA6NKF7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC24.81■■□□□ 1.56
TMEM88BA6NKF7 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC24.81■■□□□ 1.56
TMEM88BA6NKF7 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
TMEM88BA6NKF7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC24.81■■□□□ 1.56
TMEM88BA6NKF7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TMEM88BA6NKF7 MTDHP1-201ENST00000605323 784 ntBASIC24.81■■□□□ 1.56
TMEM88BA6NKF7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
TMEM88BA6NKF7 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
TMEM88BA6NKF7 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
TMEM88BA6NKF7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TMEM88BA6NKF7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
TMEM88BA6NKF7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
TMEM88BA6NKF7 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
TMEM88BA6NKF7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
TMEM88BA6NKF7 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
TMEM88BA6NKF7 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC24.8■■□□□ 1.56
TMEM88BA6NKF7 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
TMEM88BA6NKF7 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
TMEM88BA6NKF7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC24.8■■□□□ 1.56
TMEM88BA6NKF7 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
TMEM88BA6NKF7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
TMEM88BA6NKF7 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC24.8■■□□□ 1.56
TMEM88BA6NKF7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
TMEM88BA6NKF7 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC24.8■■□□□ 1.56
TMEM88BA6NKF7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
TMEM88BA6NKF7 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
TMEM88BA6NKF7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC24.79■■□□□ 1.56
TMEM88BA6NKF7 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
TMEM88BA6NKF7 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
TMEM88BA6NKF7 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
TMEM88BA6NKF7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
TMEM88BA6NKF7 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
TMEM88BA6NKF7 AL023875.1-201ENST00000640777 796 ntBASIC24.79■■□□□ 1.56
TMEM88BA6NKF7 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
TMEM88BA6NKF7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC24.79■■□□□ 1.56
TMEM88BA6NKF7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC24.79■■□□□ 1.56
TMEM88BA6NKF7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC24.79■■□□□ 1.56
TMEM88BA6NKF7 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
TMEM88BA6NKF7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC24.79■■□□□ 1.56
TMEM88BA6NKF7 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
TMEM88BA6NKF7 CRK-204ENST00000574295 1391 ntTSL 5 BASIC24.79■■□□□ 1.56
TMEM88BA6NKF7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
TMEM88BA6NKF7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC24.79■■□□□ 1.56
TMEM88BA6NKF7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
TMEM88BA6NKF7 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
TMEM88BA6NKF7 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TMEM88BA6NKF7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TMEM88BA6NKF7 PENK-204ENST00000518770 863 ntTSL 2 BASIC24.78■■□□□ 1.56
TMEM88BA6NKF7 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC24.78■■□□□ 1.56
TMEM88BA6NKF7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC24.78■■□□□ 1.56
TMEM88BA6NKF7 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC24.78■■□□□ 1.56
TMEM88BA6NKF7 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC24.78■■□□□ 1.56
TMEM88BA6NKF7 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC24.78■■□□□ 1.56
TMEM88BA6NKF7 KLF2-202ENST00000592003 564 ntTSL 3 BASIC24.78■■□□□ 1.56
TMEM88BA6NKF7 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC24.78■■□□□ 1.56
TMEM88BA6NKF7 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
TMEM88BA6NKF7 H19-210ENST00000439725 1929 ntTSL 2 BASIC24.78■■□□□ 1.56
TMEM88BA6NKF7 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
TMEM88BA6NKF7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
TMEM88BA6NKF7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC24.77■■□□□ 1.56
TMEM88BA6NKF7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
TMEM88BA6NKF7 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
TMEM88BA6NKF7 MCRIP2P1-201ENST00000394346 511 ntBASIC24.77■■□□□ 1.56
TMEM88BA6NKF7 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
TMEM88BA6NKF7 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
TMEM88BA6NKF7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
TMEM88BA6NKF7 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC24.77■■□□□ 1.56
TMEM88BA6NKF7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
TMEM88BA6NKF7 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
TMEM88BA6NKF7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
TMEM88BA6NKF7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
TMEM88BA6NKF7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
TMEM88BA6NKF7 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
TMEM88BA6NKF7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
TMEM88BA6NKF7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TMEM88BA6NKF7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
TMEM88BA6NKF7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TMEM88BA6NKF7 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
TMEM88BA6NKF7 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
TMEM88BA6NKF7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC24.76■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms