Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC27.14■■□□□ 1.94
CCNL1Q9UK58 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC27.14■■□□□ 1.93
CCNL1Q9UK58 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC27.14■■□□□ 1.93
CCNL1Q9UK58 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
CCNL1Q9UK58 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
CCNL1Q9UK58 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
CCNL1Q9UK58 FAM210CP-201ENST00000445714 574 ntBASIC27.13■■□□□ 1.93
CCNL1Q9UK58 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC27.13■■□□□ 1.93
CCNL1Q9UK58 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC27.13■■□□□ 1.93
CCNL1Q9UK58 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC27.13■■□□□ 1.93
CCNL1Q9UK58 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC27.13■■□□□ 1.93
CCNL1Q9UK58 CYP2T3P-201ENST00000601990 817 ntBASIC27.13■■□□□ 1.93
CCNL1Q9UK58 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC27.13■■□□□ 1.93
CCNL1Q9UK58 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC27.13■■□□□ 1.93
CCNL1Q9UK58 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC27.13■■□□□ 1.93
CCNL1Q9UK58 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC27.13■■□□□ 1.93
CCNL1Q9UK58 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
CCNL1Q9UK58 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CCNL1Q9UK58 RARG-204ENST00000543726 1779 ntTSL 2 BASIC27.12■■□□□ 1.93
CCNL1Q9UK58 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
CCNL1Q9UK58 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CCNL1Q9UK58 AC211429.1-201ENST00000415277 523 ntBASIC27.12■■□□□ 1.93
CCNL1Q9UK58 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
CCNL1Q9UK58 SNORA78-201ENST00000459373 127 ntBASIC27.12■■□□□ 1.93
CCNL1Q9UK58 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CCNL1Q9UK58 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC27.12■■□□□ 1.93
CCNL1Q9UK58 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CCNL1Q9UK58 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CCNL1Q9UK58 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
CCNL1Q9UK58 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CCNL1Q9UK58 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC27.11■■□□□ 1.93
CCNL1Q9UK58 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC27.11■■□□□ 1.93
CCNL1Q9UK58 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CCNL1Q9UK58 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC27.11■■□□□ 1.93
CCNL1Q9UK58 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CCNL1Q9UK58 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC27.11■■□□□ 1.93
CCNL1Q9UK58 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC27.11■■□□□ 1.93
CCNL1Q9UK58 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC27.11■■□□□ 1.93
CCNL1Q9UK58 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
CCNL1Q9UK58 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC27.1■■□□□ 1.93
CCNL1Q9UK58 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC27.1■■□□□ 1.93
CCNL1Q9UK58 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC27.1■■□□□ 1.93
CCNL1Q9UK58 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC27.1■■□□□ 1.93
CCNL1Q9UK58 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC27.1■■□□□ 1.93
CCNL1Q9UK58 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC27.1■■□□□ 1.93
CCNL1Q9UK58 SPIB-206ENST00000596074 847 ntTSL 2 BASIC27.1■■□□□ 1.93
CCNL1Q9UK58 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC27.1■■□□□ 1.93
CCNL1Q9UK58 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
CCNL1Q9UK58 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
CCNL1Q9UK58 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
CCNL1Q9UK58 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CCNL1Q9UK58 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CCNL1Q9UK58 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
CCNL1Q9UK58 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
CCNL1Q9UK58 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC27.09■■□□□ 1.93
CCNL1Q9UK58 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC27.09■■□□□ 1.93
CCNL1Q9UK58 REXO1L12P-201ENST00000622156 912 ntBASIC27.09■■□□□ 1.93
CCNL1Q9UK58 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC27.09■■□□□ 1.93
CCNL1Q9UK58 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CCNL1Q9UK58 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CCNL1Q9UK58 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.93
CCNL1Q9UK58 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC27.08■■□□□ 1.93
CCNL1Q9UK58 PNMA6B-201ENST00000538162 1200 ntBASIC27.08■■□□□ 1.93
CCNL1Q9UK58 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CCNL1Q9UK58 RN7SL471P-201ENST00000580476 299 ntBASIC27.08■■□□□ 1.93
CCNL1Q9UK58 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
CCNL1Q9UK58 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC27.08■■□□□ 1.93
CCNL1Q9UK58 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC27.08■■□□□ 1.93
CCNL1Q9UK58 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
CCNL1Q9UK58 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC27.07■■□□□ 1.92
CCNL1Q9UK58 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CCNL1Q9UK58 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CCNL1Q9UK58 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
CCNL1Q9UK58 KRT17P3-201ENST00000420566 1262 ntBASIC27.07■■□□□ 1.92
CCNL1Q9UK58 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
CCNL1Q9UK58 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
CCNL1Q9UK58 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
CCNL1Q9UK58 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC27.07■■□□□ 1.92
CCNL1Q9UK58 AC233263.1-201ENST00000578059 224 ntBASIC27.07■■□□□ 1.92
CCNL1Q9UK58 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC27.07■■□□□ 1.92
CCNL1Q9UK58 FAM21FP-204ENST00000608637 956 ntBASIC27.07■■□□□ 1.92
CCNL1Q9UK58 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC27.07■■□□□ 1.92
CCNL1Q9UK58 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
CCNL1Q9UK58 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
CCNL1Q9UK58 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
CCNL1Q9UK58 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CCNL1Q9UK58 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
CCNL1Q9UK58 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC27.06■■□□□ 1.92
CCNL1Q9UK58 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC27.06■■□□□ 1.92
CCNL1Q9UK58 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC27.06■■□□□ 1.92
CCNL1Q9UK58 AC010331.1-201ENST00000611423 582 ntBASIC27.06■■□□□ 1.92
CCNL1Q9UK58 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
CCNL1Q9UK58 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC27.06■■□□□ 1.92
CCNL1Q9UK58 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC27.06■■□□□ 1.92
CCNL1Q9UK58 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CCNL1Q9UK58 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CCNL1Q9UK58 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CCNL1Q9UK58 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CCNL1Q9UK58 AC100791.3-201ENST00000617619 330 ntBASIC27.05■■□□□ 1.92
CCNL1Q9UK58 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC27.05■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms