Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RLIMQ9NVW2 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RLIMQ9NVW2 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RLIMQ9NVW2 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RLIMQ9NVW2 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RLIMQ9NVW2 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RLIMQ9NVW2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RLIMQ9NVW2 AP001330.3-201ENST00000520123 633 ntBASIC19.61■□□□□ 0.73
RLIMQ9NVW2 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.61■□□□□ 0.73
RLIMQ9NVW2 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.61■□□□□ 0.73
RLIMQ9NVW2 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.61■□□□□ 0.73
RLIMQ9NVW2 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.61■□□□□ 0.73
RLIMQ9NVW2 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
RLIMQ9NVW2 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RLIMQ9NVW2 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RLIMQ9NVW2 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RLIMQ9NVW2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RLIMQ9NVW2 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
RLIMQ9NVW2 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
RLIMQ9NVW2 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RLIMQ9NVW2 EDA-201ENST00000338901 1233 ntBASIC19.6■□□□□ 0.73
RLIMQ9NVW2 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.6■□□□□ 0.73
RLIMQ9NVW2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.6■□□□□ 0.73
RLIMQ9NVW2 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.6■□□□□ 0.73
RLIMQ9NVW2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RLIMQ9NVW2 AC027682.1-201ENST00000562846 899 ntBASIC19.6■□□□□ 0.73
RLIMQ9NVW2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
RLIMQ9NVW2 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.6■□□□□ 0.73
RLIMQ9NVW2 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RLIMQ9NVW2 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RLIMQ9NVW2 LINC01521-201ENST00000504184 1943 ntBASIC19.6■□□□□ 0.73
RLIMQ9NVW2 AP006587.3-201ENST00000525742 1516 ntBASIC19.6■□□□□ 0.73
RLIMQ9NVW2 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.6■□□□□ 0.73
RLIMQ9NVW2 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RLIMQ9NVW2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.59■□□□□ 0.73
RLIMQ9NVW2 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RLIMQ9NVW2 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RLIMQ9NVW2 TSPY26P-201ENST00000476365 1326 ntBASIC19.59■□□□□ 0.73
RLIMQ9NVW2 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.59■□□□□ 0.73
RLIMQ9NVW2 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RLIMQ9NVW2 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
RLIMQ9NVW2 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.59■□□□□ 0.73
RLIMQ9NVW2 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RLIMQ9NVW2 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
RLIMQ9NVW2 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RLIMQ9NVW2 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RLIMQ9NVW2 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.59■□□□□ 0.73
RLIMQ9NVW2 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RLIMQ9NVW2 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RLIMQ9NVW2 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RLIMQ9NVW2 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RLIMQ9NVW2 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RLIMQ9NVW2 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
RLIMQ9NVW2 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RLIMQ9NVW2 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
RLIMQ9NVW2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RLIMQ9NVW2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.58■□□□□ 0.72
RLIMQ9NVW2 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.58■□□□□ 0.72
RLIMQ9NVW2 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.58■□□□□ 0.72
RLIMQ9NVW2 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RLIMQ9NVW2 AF213884.3-201ENST00000563833 479 ntBASIC19.58■□□□□ 0.72
RLIMQ9NVW2 AL355001.2-201ENST00000620617 1191 ntBASIC19.58■□□□□ 0.72
RLIMQ9NVW2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RLIMQ9NVW2 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RLIMQ9NVW2 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RLIMQ9NVW2 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RLIMQ9NVW2 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.58■□□□□ 0.72
RLIMQ9NVW2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
RLIMQ9NVW2 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RLIMQ9NVW2 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.57■□□□□ 0.72
RLIMQ9NVW2 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RLIMQ9NVW2 LINC01006-201ENST00000333319 2292 ntBASIC19.57■□□□□ 0.72
RLIMQ9NVW2 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RLIMQ9NVW2 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.57■□□□□ 0.72
RLIMQ9NVW2 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RLIMQ9NVW2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.57■□□□□ 0.72
RLIMQ9NVW2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.57■□□□□ 0.72
RLIMQ9NVW2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
RLIMQ9NVW2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.57■□□□□ 0.72
RLIMQ9NVW2 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.57■□□□□ 0.72
RLIMQ9NVW2 AL031432.3-201ENST00000607698 485 ntBASIC19.57■□□□□ 0.72
RLIMQ9NVW2 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RLIMQ9NVW2 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.57■□□□□ 0.72
RLIMQ9NVW2 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RLIMQ9NVW2 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.57■□□□□ 0.72
RLIMQ9NVW2 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RLIMQ9NVW2 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.56■□□□□ 0.72
RLIMQ9NVW2 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RLIMQ9NVW2 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RLIMQ9NVW2 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RLIMQ9NVW2 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RLIMQ9NVW2 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RLIMQ9NVW2 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RLIMQ9NVW2 MIR939-201ENST00000401314 82 ntBASIC19.56■□□□□ 0.72
RLIMQ9NVW2 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RLIMQ9NVW2 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RLIMQ9NVW2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
RLIMQ9NVW2 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.56■□□□□ 0.72
RLIMQ9NVW2 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RLIMQ9NVW2 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms