Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MRPL55Q7Z7F7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC13.51□□□□□ -0.25
MRPL55Q7Z7F7 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
MRPL55Q7Z7F7 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MRPL55Q7Z7F7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MRPL55Q7Z7F7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC13.51□□□□□ -0.25
MRPL55Q7Z7F7 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MRPL55Q7Z7F7 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC13.51□□□□□ -0.25
MRPL55Q7Z7F7 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MRPL55Q7Z7F7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
MRPL55Q7Z7F7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
MRPL55Q7Z7F7 SNX3-202ENST00000349379 890 ntTSL 2 BASIC13.51□□□□□ -0.25
MRPL55Q7Z7F7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MRPL55Q7Z7F7 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MRPL55Q7Z7F7 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MRPL55Q7Z7F7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC13.51□□□□□ -0.25
MRPL55Q7Z7F7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC13.51□□□□□ -0.25
MRPL55Q7Z7F7 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MRPL55Q7Z7F7 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
MRPL55Q7Z7F7 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC13.51□□□□□ -0.25
MRPL55Q7Z7F7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC13.51□□□□□ -0.25
MRPL55Q7Z7F7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
MRPL55Q7Z7F7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
MRPL55Q7Z7F7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MRPL55Q7Z7F7 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MRPL55Q7Z7F7 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC13.51□□□□□ -0.25
MRPL55Q7Z7F7 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC13.5□□□□□ -0.25
MRPL55Q7Z7F7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MRPL55Q7Z7F7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
MRPL55Q7Z7F7 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
MRPL55Q7Z7F7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
MRPL55Q7Z7F7 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
MRPL55Q7Z7F7 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC13.5□□□□□ -0.25
MRPL55Q7Z7F7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC13.5□□□□□ -0.25
MRPL55Q7Z7F7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
MRPL55Q7Z7F7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC13.5□□□□□ -0.25
MRPL55Q7Z7F7 BX842568.3-201ENST00000418104 571 ntBASIC13.5□□□□□ -0.25
MRPL55Q7Z7F7 AC131212.1-201ENST00000613771 668 ntBASIC13.5□□□□□ -0.25
MRPL55Q7Z7F7 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC13.5□□□□□ -0.25
MRPL55Q7Z7F7 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC13.5□□□□□ -0.25
MRPL55Q7Z7F7 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MRPL55Q7Z7F7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
MRPL55Q7Z7F7 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
MRPL55Q7Z7F7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC13.5□□□□□ -0.25
MRPL55Q7Z7F7 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
MRPL55Q7Z7F7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC13.5□□□□□ -0.25
MRPL55Q7Z7F7 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
MRPL55Q7Z7F7 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MRPL55Q7Z7F7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
MRPL55Q7Z7F7 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC13.49□□□□□ -0.25
MRPL55Q7Z7F7 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MRPL55Q7Z7F7 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MRPL55Q7Z7F7 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
MRPL55Q7Z7F7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC13.49□□□□□ -0.25
MRPL55Q7Z7F7 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MRPL55Q7Z7F7 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MRPL55Q7Z7F7 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
MRPL55Q7Z7F7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC13.49□□□□□ -0.25
MRPL55Q7Z7F7 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC13.49□□□□□ -0.25
MRPL55Q7Z7F7 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC13.49□□□□□ -0.25
MRPL55Q7Z7F7 MIR4767-201ENST00000582827 78 ntBASIC13.49□□□□□ -0.25
MRPL55Q7Z7F7 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MRPL55Q7Z7F7 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MRPL55Q7Z7F7 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MRPL55Q7Z7F7 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC13.49□□□□□ -0.25
MRPL55Q7Z7F7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC13.49□□□□□ -0.25
MRPL55Q7Z7F7 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MRPL55Q7Z7F7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MRPL55Q7Z7F7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MRPL55Q7Z7F7 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MRPL55Q7Z7F7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MRPL55Q7Z7F7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC13.48□□□□□ -0.25
MRPL55Q7Z7F7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC13.48□□□□□ -0.25
MRPL55Q7Z7F7 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MRPL55Q7Z7F7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MRPL55Q7Z7F7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
MRPL55Q7Z7F7 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MRPL55Q7Z7F7 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MRPL55Q7Z7F7 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
MRPL55Q7Z7F7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MRPL55Q7Z7F7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MRPL55Q7Z7F7 UNC93B3-201ENST00000308076 687 ntBASIC13.48□□□□□ -0.25
MRPL55Q7Z7F7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MRPL55Q7Z7F7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MRPL55Q7Z7F7 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
MRPL55Q7Z7F7 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC13.48□□□□□ -0.25
MRPL55Q7Z7F7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC13.48□□□□□ -0.25
MRPL55Q7Z7F7 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC13.48□□□□□ -0.25
MRPL55Q7Z7F7 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC13.48□□□□□ -0.25
MRPL55Q7Z7F7 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC13.48□□□□□ -0.25
MRPL55Q7Z7F7 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC13.48□□□□□ -0.25
MRPL55Q7Z7F7 AC126544.1-201ENST00000580842 1059 ntBASIC13.48□□□□□ -0.25
MRPL55Q7Z7F7 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MRPL55Q7Z7F7 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
MRPL55Q7Z7F7 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
MRPL55Q7Z7F7 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MRPL55Q7Z7F7 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MRPL55Q7Z7F7 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC13.48□□□□□ -0.25
MRPL55Q7Z7F7 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC13.48□□□□□ -0.25
MRPL55Q7Z7F7 AC005229.4-201ENST00000610085 2198 ntBASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms