Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1brtQ3UNC9 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1brtQ3UNC9 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1brtQ3UNC9 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1brtQ3UNC9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Cks1brtQ3UNC9 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1brtQ3UNC9 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1brtQ3UNC9 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1brtQ3UNC9 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Cks1brtQ3UNC9 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1brtQ3UNC9 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1brtQ3UNC9 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Cks1brtQ3UNC9 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Cks1brtQ3UNC9 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cks1brtQ3UNC9 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cks1brtQ3UNC9 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cks1brtQ3UNC9 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cks1brtQ3UNC9 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cks1brtQ3UNC9 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Cks1brtQ3UNC9 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC13.44□□□□□ -0.26
Cks1brtQ3UNC9 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cks1brtQ3UNC9 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cks1brtQ3UNC9 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
Cks1brtQ3UNC9 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
Cks1brtQ3UNC9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cks1brtQ3UNC9 Gm9885-202ENSMUST00000186234 2209 ntBASIC13.44□□□□□ -0.26
Cks1brtQ3UNC9 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cks1brtQ3UNC9 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC13.44□□□□□ -0.26
Cks1brtQ3UNC9 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cks1brtQ3UNC9 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cks1brtQ3UNC9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cks1brtQ3UNC9 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cks1brtQ3UNC9 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cks1brtQ3UNC9 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cks1brtQ3UNC9 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cks1brtQ3UNC9 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cks1brtQ3UNC9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC13.43□□□□□ -0.26
Cks1brtQ3UNC9 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cks1brtQ3UNC9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cks1brtQ3UNC9 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cks1brtQ3UNC9 Gm8503-201ENSMUST00000118131 455 ntBASIC13.43□□□□□ -0.26
Cks1brtQ3UNC9 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cks1brtQ3UNC9 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cks1brtQ3UNC9 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cks1brtQ3UNC9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cks1brtQ3UNC9 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.43□□□□□ -0.26
Cks1brtQ3UNC9 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cks1brtQ3UNC9 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Cks1brtQ3UNC9 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cks1brtQ3UNC9 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cks1brtQ3UNC9 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Cks1brtQ3UNC9 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cks1brtQ3UNC9 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Cks1brtQ3UNC9 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Cks1brtQ3UNC9 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cks1brtQ3UNC9 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cks1brtQ3UNC9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cks1brtQ3UNC9 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cks1brtQ3UNC9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cks1brtQ3UNC9 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC13.42□□□□□ -0.26
Cks1brtQ3UNC9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cks1brtQ3UNC9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cks1brtQ3UNC9 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cks1brtQ3UNC9 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cks1brtQ3UNC9 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cks1brtQ3UNC9 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cks1brtQ3UNC9 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cks1brtQ3UNC9 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cks1brtQ3UNC9 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cks1brtQ3UNC9 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cks1brtQ3UNC9 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cks1brtQ3UNC9 Ddx41-204ENSMUST00000224765 2199 ntBASIC13.42□□□□□ -0.26
Cks1brtQ3UNC9 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cks1brtQ3UNC9 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cks1brtQ3UNC9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cks1brtQ3UNC9 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cks1brtQ3UNC9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC13.42□□□□□ -0.26
Cks1brtQ3UNC9 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Cks1brtQ3UNC9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Cks1brtQ3UNC9 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cks1brtQ3UNC9 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cks1brtQ3UNC9 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cks1brtQ3UNC9 Gm20100-201ENSMUST00000209418 2272 ntBASIC13.41□□□□□ -0.26
Cks1brtQ3UNC9 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.41□□□□□ -0.26
Cks1brtQ3UNC9 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cks1brtQ3UNC9 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cks1brtQ3UNC9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cks1brtQ3UNC9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC13.41□□□□□ -0.26
Cks1brtQ3UNC9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Cks1brtQ3UNC9 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cks1brtQ3UNC9 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cks1brtQ3UNC9 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Cks1brtQ3UNC9 Fst-202ENSMUST00000223640 2612 ntBASIC13.41□□□□□ -0.26
Cks1brtQ3UNC9 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cks1brtQ3UNC9 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cks1brtQ3UNC9 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cks1brtQ3UNC9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cks1brtQ3UNC9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC13.4□□□□□ -0.26
Cks1brtQ3UNC9 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Cks1brtQ3UNC9 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms