Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC30.47■■■□□ 2.47
CLTCL1P53675 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC30.47■■■□□ 2.47
CLTCL1P53675 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC30.47■■■□□ 2.47
CLTCL1P53675 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC30.47■■■□□ 2.47
CLTCL1P53675 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC30.47■■■□□ 2.47
CLTCL1P53675 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CLTCL1P53675 AL591742.1-201ENST00000604433 565 ntBASIC30.47■■■□□ 2.47
CLTCL1P53675 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC30.47■■■□□ 2.47
CLTCL1P53675 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
CLTCL1P53675 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
CLTCL1P53675 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC30.47■■■□□ 2.47
CLTCL1P53675 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC30.47■■■□□ 2.47
CLTCL1P53675 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC30.47■■■□□ 2.47
CLTCL1P53675 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC30.47■■■□□ 2.47
CLTCL1P53675 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CLTCL1P53675 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
CLTCL1P53675 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC30.47■■■□□ 2.47
CLTCL1P53675 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CLTCL1P53675 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CLTCL1P53675 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC30.46■■■□□ 2.47
CLTCL1P53675 AC092053.2-201ENST00000640557 1818 ntBASIC30.46■■■□□ 2.47
CLTCL1P53675 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC30.46■■■□□ 2.47
CLTCL1P53675 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC30.46■■■□□ 2.47
CLTCL1P53675 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
CLTCL1P53675 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CLTCL1P53675 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
CLTCL1P53675 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
CLTCL1P53675 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC30.46■■■□□ 2.47
CLTCL1P53675 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
CLTCL1P53675 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
CLTCL1P53675 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
CLTCL1P53675 GAS7-202ENST00000396115 929 ntTSL 5 BASIC30.45■■■□□ 2.47
CLTCL1P53675 AC093827.2-201ENST00000512654 315 ntBASIC30.45■■■□□ 2.47
CLTCL1P53675 C11orf96-202ENST00000528572 1834 ntBASIC30.45■■■□□ 2.47
CLTCL1P53675 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
CLTCL1P53675 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.46
CLTCL1P53675 C1orf229-201ENST00000623686 2258 ntBASIC30.45■■■□□ 2.46
CLTCL1P53675 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
CLTCL1P53675 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC30.44■■■□□ 2.46
CLTCL1P53675 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC30.44■■■□□ 2.46
CLTCL1P53675 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC30.44■■■□□ 2.46
CLTCL1P53675 RPS2P52-201ENST00000469610 820 ntBASIC30.44■■■□□ 2.46
CLTCL1P53675 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
CLTCL1P53675 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CLTCL1P53675 KRT17P1-201ENST00000399211 1546 ntBASIC30.44■■■□□ 2.46
CLTCL1P53675 AC010542.4-201ENST00000563151 1910 ntBASIC30.44■■■□□ 2.46
CLTCL1P53675 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CLTCL1P53675 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC30.44■■■□□ 2.46
CLTCL1P53675 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC30.44■■■□□ 2.46
CLTCL1P53675 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC30.44■■■□□ 2.46
CLTCL1P53675 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC30.44■■■□□ 2.46
CLTCL1P53675 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC30.44■■■□□ 2.46
CLTCL1P53675 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC30.44■■■□□ 2.46
CLTCL1P53675 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
CLTCL1P53675 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC30.43■■■□□ 2.46
CLTCL1P53675 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC30.43■■■□□ 2.46
CLTCL1P53675 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC30.43■■■□□ 2.46
CLTCL1P53675 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC30.43■■■□□ 2.46
CLTCL1P53675 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
CLTCL1P53675 ADM-205ENST00000528544 586 ntTSL 2 BASIC30.43■■■□□ 2.46
CLTCL1P53675 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
CLTCL1P53675 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC30.43■■■□□ 2.46
CLTCL1P53675 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
CLTCL1P53675 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC30.43■■■□□ 2.46
CLTCL1P53675 AC068473.5-201ENST00000616428 2072 ntBASIC30.43■■■□□ 2.46
CLTCL1P53675 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC30.43■■■□□ 2.46
CLTCL1P53675 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC30.42■■■□□ 2.46
CLTCL1P53675 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC30.42■■■□□ 2.46
CLTCL1P53675 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC30.42■■■□□ 2.46
CLTCL1P53675 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
CLTCL1P53675 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC30.42■■■□□ 2.46
CLTCL1P53675 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC30.42■■■□□ 2.46
CLTCL1P53675 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC30.42■■■□□ 2.46
CLTCL1P53675 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
CLTCL1P53675 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC30.42■■■□□ 2.46
CLTCL1P53675 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC30.41■■■□□ 2.46
CLTCL1P53675 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.46
CLTCL1P53675 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
CLTCL1P53675 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC30.41■■■□□ 2.46
CLTCL1P53675 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC30.41■■■□□ 2.46
CLTCL1P53675 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
CLTCL1P53675 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
CLTCL1P53675 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC30.41■■■□□ 2.46
CLTCL1P53675 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC30.41■■■□□ 2.46
CLTCL1P53675 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC30.41■■■□□ 2.46
CLTCL1P53675 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC30.41■■■□□ 2.46
CLTCL1P53675 DET1-205ENST00000558413 583 ntTSL 4 BASIC30.41■■■□□ 2.46
CLTCL1P53675 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC30.41■■■□□ 2.46
CLTCL1P53675 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC30.41■■■□□ 2.46
CLTCL1P53675 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
CLTCL1P53675 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
CLTCL1P53675 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
CLTCL1P53675 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC30.4■■■□□ 2.46
CLTCL1P53675 INO80E-214ENST00000620599 515 ntTSL 2 BASIC30.4■■■□□ 2.46
CLTCL1P53675 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC30.4■■■□□ 2.46
CLTCL1P53675 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC30.4■■■□□ 2.46
CLTCL1P53675 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CLTCL1P53675 AL355472.2-201ENST00000422958 438 ntBASIC30.4■■■□□ 2.46
CLTCL1P53675 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC30.4■■■□□ 2.46
CLTCL1P53675 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC30.4■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms