Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLK3P49761 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
CLK3P49761 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.9■□□□□ 0.78
CLK3P49761 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLK3P49761 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLK3P49761 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.9■□□□□ 0.78
CLK3P49761 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.9■□□□□ 0.78
CLK3P49761 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.9■□□□□ 0.78
CLK3P49761 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLK3P49761 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.9■□□□□ 0.78
CLK3P49761 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.9■□□□□ 0.78
CLK3P49761 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLK3P49761 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLK3P49761 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLK3P49761 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.89■□□□□ 0.78
CLK3P49761 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLK3P49761 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLK3P49761 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLK3P49761 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLK3P49761 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLK3P49761 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLK3P49761 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.89■□□□□ 0.77
CLK3P49761 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLK3P49761 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.89■□□□□ 0.77
CLK3P49761 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
CLK3P49761 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLK3P49761 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.89■□□□□ 0.77
CLK3P49761 OR7E47P-201ENST00000546390 1422 ntBASIC19.89■□□□□ 0.77
CLK3P49761 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLK3P49761 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.89■□□□□ 0.77
CLK3P49761 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLK3P49761 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLK3P49761 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLK3P49761 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.88■□□□□ 0.77
CLK3P49761 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLK3P49761 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLK3P49761 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CLK3P49761 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLK3P49761 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.88■□□□□ 0.77
CLK3P49761 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.88■□□□□ 0.77
CLK3P49761 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.88■□□□□ 0.77
CLK3P49761 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.88■□□□□ 0.77
CLK3P49761 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLK3P49761 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLK3P49761 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLK3P49761 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLK3P49761 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CLK3P49761 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLK3P49761 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLK3P49761 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLK3P49761 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLK3P49761 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CLK3P49761 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.87■□□□□ 0.77
CLK3P49761 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CLK3P49761 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.87■□□□□ 0.77
CLK3P49761 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.87■□□□□ 0.77
CLK3P49761 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLK3P49761 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLK3P49761 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CLK3P49761 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLK3P49761 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CLK3P49761 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.87■□□□□ 0.77
CLK3P49761 AC092667.1-201ENST00000434301 2586 ntBASIC19.87■□□□□ 0.77
CLK3P49761 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLK3P49761 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLK3P49761 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLK3P49761 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CLK3P49761 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CLK3P49761 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLK3P49761 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.86■□□□□ 0.77
CLK3P49761 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.86■□□□□ 0.77
CLK3P49761 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLK3P49761 AC105265.2-201ENST00000467189 838 ntBASIC19.86■□□□□ 0.77
CLK3P49761 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.86■□□□□ 0.77
CLK3P49761 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.86■□□□□ 0.77
CLK3P49761 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.86■□□□□ 0.77
CLK3P49761 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLK3P49761 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLK3P49761 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLK3P49761 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLK3P49761 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CLK3P49761 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLK3P49761 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLK3P49761 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.85■□□□□ 0.77
CLK3P49761 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLK3P49761 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.85■□□□□ 0.77
CLK3P49761 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLK3P49761 MIR572-201ENST00000384983 95 ntBASIC19.85■□□□□ 0.77
CLK3P49761 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.85■□□□□ 0.77
CLK3P49761 AC105233.4-201ENST00000642045 216 ntBASIC19.85■□□□□ 0.77
CLK3P49761 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLK3P49761 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLK3P49761 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CLK3P49761 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.84■□□□□ 0.77
CLK3P49761 AL391422.3-201ENST00000603791 2761 ntBASIC19.84■□□□□ 0.77
CLK3P49761 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.84■□□□□ 0.77
CLK3P49761 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLK3P49761 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLK3P49761 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLK3P49761 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms