Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AC069544.1-201ENST00000609399 999 ntBASIC24.45■■□□□ 1.5
TM4SF4P48230 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TM4SF4P48230 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TM4SF4P48230 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
TM4SF4P48230 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC24.45■■□□□ 1.5
TM4SF4P48230 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.44■■□□□ 1.5
TM4SF4P48230 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TM4SF4P48230 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
TM4SF4P48230 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
TM4SF4P48230 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
TM4SF4P48230 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
TM4SF4P48230 AC092368.3-202ENST00000574180 1591 ntBASIC24.44■■□□□ 1.5
TM4SF4P48230 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC24.44■■□□□ 1.5
TM4SF4P48230 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
TM4SF4P48230 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.43■■□□□ 1.5
TM4SF4P48230 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TM4SF4P48230 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC24.43■■□□□ 1.5
TM4SF4P48230 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
TM4SF4P48230 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC24.43■■□□□ 1.5
TM4SF4P48230 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC24.43■■□□□ 1.5
TM4SF4P48230 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TM4SF4P48230 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC24.43■■□□□ 1.5
TM4SF4P48230 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TM4SF4P48230 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
TM4SF4P48230 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TM4SF4P48230 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
TM4SF4P48230 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
TM4SF4P48230 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC24.42■■□□□ 1.5
TM4SF4P48230 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.42■■□□□ 1.5
TM4SF4P48230 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC24.42■■□□□ 1.5
TM4SF4P48230 RPS2P55-201ENST00000397318 883 ntBASIC24.42■■□□□ 1.5
TM4SF4P48230 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC24.42■■□□□ 1.5
TM4SF4P48230 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
TM4SF4P48230 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC24.42■■□□□ 1.5
TM4SF4P48230 AC107956.1-201ENST00000494359 873 ntBASIC24.42■■□□□ 1.5
TM4SF4P48230 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
TM4SF4P48230 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC24.42■■□□□ 1.5
TM4SF4P48230 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TM4SF4P48230 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TM4SF4P48230 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TM4SF4P48230 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TM4SF4P48230 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC24.41■■□□□ 1.5
TM4SF4P48230 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC24.41■■□□□ 1.5
TM4SF4P48230 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TM4SF4P48230 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC24.41■■□□□ 1.5
TM4SF4P48230 TK2-213ENST00000563369 882 ntTSL 5 BASIC24.41■■□□□ 1.5
TM4SF4P48230 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC24.41■■□□□ 1.5
TM4SF4P48230 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC24.41■■□□□ 1.5
TM4SF4P48230 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TM4SF4P48230 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TM4SF4P48230 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC24.41■■□□□ 1.5
TM4SF4P48230 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC24.41■■□□□ 1.5
TM4SF4P48230 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TM4SF4P48230 LINC01124-201ENST00000409786 2117 ntBASIC24.4■■□□□ 1.5
TM4SF4P48230 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TM4SF4P48230 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC24.4■■□□□ 1.5
TM4SF4P48230 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TM4SF4P48230 SLC29A4P2-201ENST00000504749 1089 ntBASIC24.4■■□□□ 1.5
TM4SF4P48230 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC24.4■■□□□ 1.5
TM4SF4P48230 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC24.4■■□□□ 1.5
TM4SF4P48230 AL589743.5-201ENST00000616611 1050 ntBASIC24.4■■□□□ 1.5
TM4SF4P48230 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC24.4■■□□□ 1.5
TM4SF4P48230 AC061975.6-201ENST00000579045 1553 ntBASIC24.4■■□□□ 1.5
TM4SF4P48230 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TM4SF4P48230 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
TM4SF4P48230 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
TM4SF4P48230 ISG20-202ENST00000379224 540 ntTSL 3 BASIC24.39■■□□□ 1.49
TM4SF4P48230 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TM4SF4P48230 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC24.39■■□□□ 1.49
TM4SF4P48230 TSPY7P-201ENST00000431358 1114 ntBASIC24.39■■□□□ 1.49
TM4SF4P48230 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
TM4SF4P48230 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC24.39■■□□□ 1.49
TM4SF4P48230 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC24.39■■□□□ 1.49
TM4SF4P48230 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC24.39■■□□□ 1.49
TM4SF4P48230 OR2A1-AS1-207ENST00000486094 819 ntBASIC24.39■■□□□ 1.49
TM4SF4P48230 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC24.39■■□□□ 1.49
TM4SF4P48230 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TM4SF4P48230 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TM4SF4P48230 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
TM4SF4P48230 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TM4SF4P48230 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TM4SF4P48230 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC24.38■■□□□ 1.49
TM4SF4P48230 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TM4SF4P48230 AC091799.1-201ENST00000422823 811 ntBASIC24.38■■□□□ 1.49
TM4SF4P48230 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TM4SF4P48230 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC24.38■■□□□ 1.49
TM4SF4P48230 SOX15-203ENST00000570788 1093 ntBASIC24.38■■□□□ 1.49
TM4SF4P48230 AC133561.5-201ENST00000635547 218 ntBASIC24.38■■□□□ 1.49
TM4SF4P48230 AC097493.4-201ENST00000641197 219 ntBASIC24.38■■□□□ 1.49
TM4SF4P48230 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TM4SF4P48230 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
TM4SF4P48230 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
TM4SF4P48230 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
TM4SF4P48230 RARG-204ENST00000543726 1779 ntTSL 2 BASIC24.37■■□□□ 1.49
TM4SF4P48230 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TM4SF4P48230 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TM4SF4P48230 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
TM4SF4P48230 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TM4SF4P48230 AC012306.2-201ENST00000609350 630 ntBASIC24.37■■□□□ 1.49
TM4SF4P48230 THRA-202ENST00000394121 2260 ntTSL 2 BASIC24.37■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms