Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
XPAP23025 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
XPAP23025 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
XPAP23025 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.26■□□□□ 0.99
XPAP23025 UBE2DNL-204ENST00000602536 740 ntBASIC21.26■□□□□ 0.99
XPAP23025 AC080038.1-201ENST00000611274 1154 ntBASIC21.26■□□□□ 0.99
XPAP23025 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.26■□□□□ 0.99
XPAP23025 RARRES2P11-201ENST00000635158 484 ntBASIC21.26■□□□□ 0.99
XPAP23025 ECEL1P1-201ENST00000373592 1742 ntBASIC21.26■□□□□ 0.99
XPAP23025 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
XPAP23025 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
XPAP23025 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
XPAP23025 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
XPAP23025 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
XPAP23025 AC133561.1-201ENST00000568600 2415 ntBASIC21.25■□□□□ 0.99
XPAP23025 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
XPAP23025 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
XPAP23025 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
XPAP23025 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
XPAP23025 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
XPAP23025 KRT18P20-201ENST00000548986 1279 ntBASIC21.25■□□□□ 0.99
XPAP23025 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
XPAP23025 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
XPAP23025 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
XPAP23025 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
XPAP23025 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
XPAP23025 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
XPAP23025 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
XPAP23025 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
XPAP23025 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
XPAP23025 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
XPAP23025 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
XPAP23025 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.24■□□□□ 0.99
XPAP23025 AC026471.6-201ENST00000622954 1905 ntBASIC21.24■□□□□ 0.99
XPAP23025 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
XPAP23025 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.24■□□□□ 0.99
XPAP23025 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
XPAP23025 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
XPAP23025 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.24■□□□□ 0.99
XPAP23025 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.24■□□□□ 0.99
XPAP23025 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
XPAP23025 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
XPAP23025 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
XPAP23025 AC011767.1-201ENST00000617410 1153 ntBASIC21.24■□□□□ 0.99
XPAP23025 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
XPAP23025 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
XPAP23025 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
XPAP23025 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
XPAP23025 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
XPAP23025 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
XPAP23025 AC010542.4-201ENST00000563151 1910 ntBASIC21.23■□□□□ 0.99
XPAP23025 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
XPAP23025 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
XPAP23025 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
XPAP23025 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
XPAP23025 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
XPAP23025 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
XPAP23025 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
XPAP23025 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.23■□□□□ 0.99
XPAP23025 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.23■□□□□ 0.99
XPAP23025 MYCNOS-205ENST00000641950 531 ntBASIC21.23■□□□□ 0.99
XPAP23025 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
XPAP23025 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
XPAP23025 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
XPAP23025 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.22■□□□□ 0.99
XPAP23025 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
XPAP23025 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
XPAP23025 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
XPAP23025 AL117328.2-201ENST00000624617 1940 ntBASIC21.22■□□□□ 0.99
XPAP23025 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
XPAP23025 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.22■□□□□ 0.99
XPAP23025 POU5F1P4-201ENST00000413175 1085 ntBASIC21.22■□□□□ 0.99
XPAP23025 AC090192.1-201ENST00000517740 490 ntBASIC21.22■□□□□ 0.99
XPAP23025 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.22■□□□□ 0.99
XPAP23025 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.22■□□□□ 0.99
XPAP23025 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.22■□□□□ 0.99
XPAP23025 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
XPAP23025 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
XPAP23025 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
XPAP23025 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
XPAP23025 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
XPAP23025 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
XPAP23025 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.22■□□□□ 0.99
XPAP23025 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
XPAP23025 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
XPAP23025 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.21■□□□□ 0.99
XPAP23025 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
XPAP23025 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
XPAP23025 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.21■□□□□ 0.99
XPAP23025 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
XPAP23025 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
XPAP23025 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
XPAP23025 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.2■□□□□ 0.99
XPAP23025 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
XPAP23025 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
XPAP23025 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.2■□□□□ 0.98
XPAP23025 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
XPAP23025 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.2■□□□□ 0.98
XPAP23025 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
XPAP23025 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms