Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.3■■□□□ 1
HLA-DPA1P20036 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.3■■□□□ 1
HLA-DPA1P20036 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HLA-DPA1P20036 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.3■■□□□ 1
HLA-DPA1P20036 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.3■■□□□ 1
HLA-DPA1P20036 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.29■■□□□ 1
HLA-DPA1P20036 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.29■■□□□ 1
HLA-DPA1P20036 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.29■■□□□ 1
HLA-DPA1P20036 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HLA-DPA1P20036 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.29■■□□□ 1
HLA-DPA1P20036 KRT87P-202ENST00000534226 1464 ntBASIC21.29■■□□□ 1
HLA-DPA1P20036 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.29■■□□□ 1
HLA-DPA1P20036 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.29■■□□□ 1
HLA-DPA1P20036 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.29■■□□□ 1
HLA-DPA1P20036 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
HLA-DPA1P20036 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.29■■□□□ 1
HLA-DPA1P20036 AC053503.5-201ENST00000601508 636 ntBASIC21.29■■□□□ 1
HLA-DPA1P20036 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.29■■□□□ 1
HLA-DPA1P20036 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.29■■□□□ 1
HLA-DPA1P20036 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HLA-DPA1P20036 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.28■■□□□ 1
HLA-DPA1P20036 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.28■■□□□ 1
HLA-DPA1P20036 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HLA-DPA1P20036 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.28■■□□□ 1
HLA-DPA1P20036 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
HLA-DPA1P20036 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.28■■□□□ 1
HLA-DPA1P20036 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.28■■□□□ 1
HLA-DPA1P20036 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.28■■□□□ 1
HLA-DPA1P20036 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.28■■□□□ 1
HLA-DPA1P20036 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
HLA-DPA1P20036 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.28■■□□□ 1
HLA-DPA1P20036 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HLA-DPA1P20036 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HLA-DPA1P20036 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HLA-DPA1P20036 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.28■■□□□ 1
HLA-DPA1P20036 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HLA-DPA1P20036 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
HLA-DPA1P20036 AC026310.3-201ENST00000625186 2373 ntBASIC21.28■■□□□ 1
HLA-DPA1P20036 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
HLA-DPA1P20036 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
HLA-DPA1P20036 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
HLA-DPA1P20036 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.27■■□□□ 1
HLA-DPA1P20036 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.27■■□□□ 1
HLA-DPA1P20036 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.27■■□□□ 1
HLA-DPA1P20036 CCDC92B-201ENST00000575506 885 ntBASIC21.27■■□□□ 1
HLA-DPA1P20036 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.27■■□□□ 1
HLA-DPA1P20036 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.27■■□□□ 1
HLA-DPA1P20036 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HLA-DPA1P20036 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.27■■□□□ 1
HLA-DPA1P20036 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.27■■□□□ 1
HLA-DPA1P20036 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
HLA-DPA1P20036 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.27■□□□□ 0.99
HLA-DPA1P20036 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.27■□□□□ 0.99
HLA-DPA1P20036 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DPA1P20036 CLDN5-201ENST00000403084 2357 ntBASIC21.26■□□□□ 0.99
HLA-DPA1P20036 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
HLA-DPA1P20036 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DPA1P20036 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DPA1P20036 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DPA1P20036 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
HLA-DPA1P20036 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.26■□□□□ 0.99
HLA-DPA1P20036 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DPA1P20036 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DPA1P20036 AC007375.3-201ENST00000600936 2314 ntBASIC21.26■□□□□ 0.99
HLA-DPA1P20036 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.26■□□□□ 0.99
HLA-DPA1P20036 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
HLA-DPA1P20036 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.25■□□□□ 0.99
HLA-DPA1P20036 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HLA-DPA1P20036 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.25■□□□□ 0.99
HLA-DPA1P20036 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.25■□□□□ 0.99
HLA-DPA1P20036 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
HLA-DPA1P20036 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
HLA-DPA1P20036 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.25■□□□□ 0.99
HLA-DPA1P20036 KRT18P14-201ENST00000534205 1250 ntBASIC21.25■□□□□ 0.99
HLA-DPA1P20036 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HLA-DPA1P20036 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HLA-DPA1P20036 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.24■□□□□ 0.99
HLA-DPA1P20036 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HLA-DPA1P20036 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HLA-DPA1P20036 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
HLA-DPA1P20036 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HLA-DPA1P20036 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HLA-DPA1P20036 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HLA-DPA1P20036 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.24■□□□□ 0.99
HLA-DPA1P20036 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.24■□□□□ 0.99
HLA-DPA1P20036 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HLA-DPA1P20036 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.24■□□□□ 0.99
HLA-DPA1P20036 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
HLA-DPA1P20036 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HLA-DPA1P20036 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HLA-DPA1P20036 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DPA1P20036 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DPA1P20036 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DPA1P20036 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DPA1P20036 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
HLA-DPA1P20036 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.23■□□□□ 0.99
HLA-DPA1P20036 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DPA1P20036 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.23■□□□□ 0.99
HLA-DPA1P20036 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DPA1P20036 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms